Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01449 ATGTTGCTGGCTCTCATATGGAAGTTTGACTTTCCACCTTTCATGGTGCTTATTATTGCCATCCTAAATGATGGTACTATAATGACAATTTCAAAAGATAGGGTAAAACCATCACCTCTTCCAGATAGCTGGAAACTGGCAGAGATATTTACTACTGGCATTGTGCTTGGTAGTTACTTGGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAAACAAATTTCTTCCCGCGAGTGTTTGGGGTCGCAACTCTTGAAAAAACTGCTCATGATGATTTCCGAAAACTTGCCTCAGCAATCTATCTTCAAGTGAGCACTATTAGCCAGGCTCTTATATTTGTAACTCGATCTCGAGGTTGGTCATATGTTGAGCGTCCCGGTTTACTGCTGGTGGTTGCTTTTATTGTTGCTCAACTGATCGCCACTTTGATTGCTGTATATGCAAGCTGGAGTTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTTATATGGTTATATAACTTAATATTCTACATCCCACTTGATTTCATTAAATTTTTAATTCGCTATGCTTTGAGTGGGAGGGCATGGGATCTTGTCATTGAGCAAAGGATTGCTTTCACAAGGCAAAAGGACTTTGGAAAGGAACAACGTGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGATTACAACCACCTGACACCAAAATGTTCACTGAGCGCACACATGTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAGAGGAGAGCTGAAATTGCAAGGTTGAGAGAACTGCATACACTGAAAGGTCATGTAGAATCAGTTGTGAGGTTGAAGGGGCTTGACATAGACACAATTCAGCAAGCATACACAGTTTGA 879 0.4118 MLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTNFFPRVFGVATLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVVAFIVAQLIATLIAVYASWSFAAIEGIGWGWAGVIWLYNLIFYIPLDFIKFLIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHVNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV. 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01449 292 Gene3D - 241 292 - -
Seca11g01449 292 PANTHER CALCIUM-TRANSPORTING ATPASE 1 225 - -
Seca11g01449 292 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 189 IPR023298 -
Seca11g01449 292 Coils Coil 243 263 - -
Seca11g01449 292 Gene3D - 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01449 Seca-Chr11 15864388 15866334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01449 1 292 Primary Pumps ATPases AT5G62670 91.781 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01449 K01535 - rcu:8258168 556.984