Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01433 ATGGAAATGGGTACTGTGACATGGGTTTTCTTGGTGATTTTGACAACATTTTTATGCCCTTTCTCTCTTGCTCTCTCTCAAGACGGTCTGACATTGTTGGAAATCAAAAGCGCTTTGAATGACACTAAGAATGTTCTCAGCAACTGGCAAGAGTTTGATGAGTCTCCTTGTGCATGGACTGGTATCACTTGTCATCCTGAGGAACAAAAAGTTCGCACAATAAATCTGCCATACATGCAACTCGGTGGAATTATATCTCCCAGCATTGGTAAACTCAGTAGACTACAGAGACTGGCGCTTCATCAGAATGGCTTGCATGGAATTATTCCTAATGAAATTACCAATTGTACTGAGCTAAGAGCCCTGTACTTGAGGGCTAATTATTTCCAAGGAGGCATACCAGCAGCTATTGGAAACCTTTCATATTTAAATATACTCAAGTTTAAATACAGGGATTTATCAAGCAACTCATTAAAAGGTGCTATACCTTCCTCTCTTGGTCGTCTCTCACATTTGCAAATTCTGAACTTGTCTACCAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTCCAGAAGAACTCGTTTATTGGCAATTTAGATCTTTGTGGGCGGCAAGTCCAAAAGCCATGTAGGACATCACTTGGTTTCCCTGTGGTGATACCACATGCTGAAAGTGATGAAGCTGCAGTCCCTACCAAAAGATCTTCACATTACATAAAATGGGTGTTAATTGGTGCAATGGCAACTATGGGCCTTGCACTTGTGATGATCCTTTCATTCCTCTGGATTCGTTTGTTATCAAAGAAGGAAAGAGTTGCTAGGAAATACACTGAAGTCAAGAAACAAGTTGATTCAGAAGCAAGTAAGAAGGCTGGCACAAAACTTATTACATTCCATGGTGATCTGCCATACACATCATCTGAGATCATAGAAAAGCTGGAGTCTCTTGATGAAGAGGATGTTGTAGGGTCAGGTGGATTTGGTACTGTTTACCGAATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGACAGAAGTCGTGAAGGGTCTGATCAAGTGTTTGAAAGGGAACTAGAGATCTTGGGGAGCATCAAGCACATAAATTTAGTTAACCTGCGTGGTTACTGCAGGCTCCCTTCTTCAAGGCTCCTTATCTATGACTATTTGGCTATAGGCAGCTTAGAGGATCTCTTGCATGAAAACACTGAACAATTACTGAATTGGAATGATCGCCTAAAGATAGCCCTTGGTTCTGCCAGGGGTTTGGCATACTTGCACCATGAATGCTGCCCAAAAATTGTTCACCGTGACATAAAATCCAGCAACATCCTTCTTGATGAAAACATGGAGCCCCATATCTCCGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACTACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCGGAATATCTACAAAGTGGGAGAGCCACTGAGAAGTCAGATGTATATAGCTTTGGAGTCCTATTGCTGGAACTTGTAACTGGAAAGAGGCCTACAGATCCTTCCTTTGTGAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTACTGAGAGAAAACAGATTGGAAGATGTGGTAGACAAAAGATGCACTGATGCAGATGCAGGAACACTTGAAGTAATTCTTGAGCTAGCAGCTAGATGCAATGCAAATGCAGATGAACGTCCATCAATGAACCAAGTATTACAGTTGCTGGAACAAGAGGTTATGTCTCCTTGCCCAAGTGATTTTTATGAGTCTCAATCAGATCACTGTTGA 1827 0.4154 MEMGTVTWVFLVILTTFLCPFSLALSQDGLTLLEIKSALNDTKNVLSNWQEFDESPCAWTGITCHPEEQKVRTINLPYMQLGGIISPSIGKLSRLQRLALHQNGLHGIIPNEITNCTELRALYLRANYFQGGIPAAIGNLSYLNILKFKYRDLSSNSLKGAIPSSLGRLSHLQILNLSTNFFSGEIPDIGVLSTFQKNSFIGNLDLCGRQVQKPCRTSLGFPVVIPHAESDEAAVPTKRSSHYIKWVLIGAMATMGLALVMILSFLWIRLLSKKERVARKYTEVKKQVDSEASKKAGTKLITFHGDLPYTSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSDQVFERELEILGSIKHINLVNLRGYCRLPSSRLLIYDYLAIGSLEDLLHENTEQLLNWNDRLKIALGSARGLAYLHHECCPKIVHRDIKSSNILLDENMEPHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFVKRGLNVVGWMNTLLRENRLEDVVDKRCTDADAGTLEVILELAARCNANADERPSMNQVLQLLEQEVMSPCPSDFYESQSDHC. 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01433 608 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 397 599 - -
Seca11g01433 608 Gene3D Phosphorylase Kinase; domain 1 280 396 - -
Seca11g01433 608 SUPERFAMILY Protein kinase-like (PK-like) 303 589 IPR011009 -
Seca11g01433 608 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Seca11g01433 608 SMART serkin_6 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01433 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Seca11g01433 608 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 192 - -
Seca11g01433 608 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Seca11g01433 608 SUPERFAMILY L domain-like 26 212 - -
Seca11g01433 608 Gene3D Transferase(Phosphotransferase) domain 1 397 598 - -
Seca11g01433 608 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 70 590 - -
Seca11g01433 608 Pfam Protein kinase domain 323 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01433 608 ProSiteProfiles Protein kinase domain profile. 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01433 608 Gene3D Ribonuclease Inhibitor 25 217 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01433 Seca-Chr11 15704826 15708648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01433 7 597 Receptor kinase-like Gene Family AT2G35620 48.904 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Seca11g01433 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01433 - - gmx:100797653 1066.6