Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01419 ATGTTCAAGTTTTTGGTTAGCAGAGCAACAAAGGTTTCAATTCCAAGGAATCACAATGCCTTTACTTATTCCAATTTGTTTCGGTGTGTTCATTCATTACAATTTGCCACGGTAGAAGCAGAACAGATATCAGGTTCTAGGCCTGCTGAAGTTTTGAACTTGGTGCAAGGTAAATGGATAGGATCTTCAAACTGGAATACAGTGGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGAAATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTTTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTTGGGAGATGTATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATACAAAGGGTTTCGCCAAAGAGTTACCAGCAAGCTGAAGGAGAAGTTTATGTGACACGGAAGTTTCTAGAGAATTTTTGCGGAGATCAGGTTCGATTCCTGGCAAGGTCTTTTGCAGTACCTGGAAATCATCTTGGACAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGCAACAAGCCCGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAGCAAATGTTGCGGCTTCTTCATACATGTGGTTTACCTGCAGAAGATGTAGACTTTATAAATTCTGATGGGAAGACAATGAACAAGCTGTTGTTGGAGGGAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGGTGATTTGAGGGGCCGCATTAAGTTGGAAGATGCTGGATTTGACTGGAAAATACTTGGCCCTGATGTTAATCAGGAAAATTACATTGCTTGGGTCTGTGACCAGGATGCATACGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTGTTATTTATGCATGAGGTCAGTCACATTGGTTATTTTGAGAACAACTGGTCGAATACTTCCTTCATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCGGACTTGACAATTGGTCCAGTCCTCACTTTTACAACTGATTCGTTGCTAGAACACACGAATAAGTTACTTGAAATACCTGGGTCAAAGCTGCTCTTTGGAGGTCAGCCTCTGGAAGATCATTCAATTCCACCAATTTATGGTGCTATTAAACCAACTGCTGTTTACGTTCCTCTTGAGGAAATTATGAAGGAAAAGAATTATGAGCTTGTGACAAAAGAAATATTCGGACCTTTTCAGGTTATTACTGACTACAAAAGCAGTCAACTATCAACTGTGTTGGATGCTGTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTTTATTCTTACAGGAAGTCATTGGAAAATCAGTAAATGGAACTACTTATGCTGGTTTAAGAGCAAGGACAACTGGAGCTCCACAGAATCACTGGTTTGGACCTGCTGGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCTATAAAACTCGTATGGTCATGTCATAGAGAAATTATCTATGATTTTGGGCCCGTGCTACAACATTGGGAAATTCCTCCATCAACCTGA 1689 0.4103 MFKFLVSRATKVSIPRNHNAFTYSNLFRCVHSLQFATVEAEQISGSRPAEVLNLVQGKWIGSSNWNTVVDPLNGDSFIKVAEVDETEIQPFVESLSSCPKHGLHNPFKAPERYLMLGDVSTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAEGEVYVTRKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPAEDVDFINSDGKTMNKLLLEGNPRMTLFTGSSRVAEKLAGDLRGRIKLEDAGFDWKILGPDVNQENYIAWVCDQDAYACSGQKCSAQSLLFMHEVSHIGYFENNWSNTSFISKLKDLAERRKLADLTIGPVLTFTTDSLLEHTNKLLEIPGSKLLFGGQPLEDHSIPPIYGAIKPTAVYVPLEEIMKEKNYELVTKEIFGPFQVITDYKSSQLSTVLDAVEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDFGPVLQHWEIPPST. 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01419 562 SUPERFAMILY ALDH-like 53 529 IPR016161 GO:0016491
Seca11g01419 562 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 302 IPR016162 GO:0016491
Seca11g01419 562 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 561 IPR044638 GO:0004029
Seca11g01419 562 FunFam probable aldehyde dehydrogenase 44 302 - -
Seca11g01419 562 Pfam Aldehyde dehydrogenase family 66 503 IPR015590 GO:0016491
Seca11g01419 562 FunFam Aldehyde dehydrogenase 12 310 507 - -
Seca11g01419 562 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 503 IPR016163 GO:0016620
Seca11g01419 562 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01419 Seca-Chr11 15577051 15594873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01419 1 562 Aldehyde Dehydrogenase Gene Family AT5G62530 76.991 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01419 K00294 - gmx:100806579 1014.6