Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01415 ATGGGCAAGTCACCGGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAAGAAGGAGTAGTTTCTCCCAAGGTGTCAGAAACTGGTTTGGCTTTAGAGCCAACCCCCAATACTATCACCAGACATGAGGAAGACCTAGTGCTGGAGAATAAAGAAGCAGAAAATATTTTACCTGGAAATCAAGAAATTGATTCAATGGGATCTGTTCATCAAGATGCACCGGTTGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCTACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGGAGAGCATTTAAGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTGTTAGTACATTATGTTGTATGTATGAAATTGTCAAGTTACAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTGATGTTGGTTTTGAAATTCGTGAAAAGTGCAATCTATTGAAGCCTCTGGATGGCAAACTTGTCAATCCAATTGCTATATCCACAGAAATTATGAAGCTATCAGCAAATGCTTTCATCCGTAAGCTTCTTGGTTCATCAACTACAATAATGGCCTTGCGTTTGCAATATGTTCGTGGCGATCCAAATTCTGTTCTAAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGGGATGCTAAGTCTCAGAGGAAGCAGGGTAATATTTCTGTTGGAGATGCTCAAATGAGCAAGTCAAAACGTACTCACAGAAAGCTTCCTACTGCAAATTTTGACTCAGTCCCAGCTCAAGCAAATCCTGAATTTGAGAAACCAAAACGAAACATAAGGAAAATTCCAAGCCAACCCACAGATCCTGTGCAGGAAAATCCACAAGCTCAGCCTCCTACTGCTAATTCTGACTCAATCCCAGTGCAGGCAAATCCTGAATTTGAGAAACCAAAACGAAACATAAGGAAAATTCCTAGCCAACCCTCGGAACCTGTCCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAGCTTGAGGAAGGTTCATAACCCAGTTGTTGAGAATGCTGTTCTGTCAGAAATTGAATCTGAGACTCCAAAGCTGCATTTGGAAAAGGAAACAGTTACCTTAAGTCTTGGTGTTTCAGAACAAGGGGTCATTAGTTCTAATGAGAAGGTCAAGAAGGACGCAACATTAACCATTTCCAGTGCGTCAGATGTAGGAATTACTCCTAGACATTCAGTTAGTAAGGAGGTGTATGAAACTCCAGGCAGCAATCAAGTGACTGTGGAATTGCAGCCCTTGACAGAGATTACAAGCAAAGATAAAAATATTTCTGATGATGAAGTAAAACATGAGCCCGAAGATTTACCAGAAACTATTTATAAAGATGAAAATTCTCACTTAACAAATGGAGACATGAGTCACAAGGAAGATCCAACAGGCAGTGAAAACCAGAAACCAACCCGGAAGGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAATAGTCCAACATTACCAAGTTATATGGCAGCAACTGAATCTGCGAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAGAGAAATAGTCATGGTCGGCGACATTCTCTGCCATCTTCAACTAACAGCAAAATCAGTTCACATTCACCTAGGACACAGAGACCAGTGCAAGCAGGTGGCAAAGGGGGCCAGAGAAGTGACAAAACTGTATCGACTTCTAGAGATGCGAATGGTGAAAGGTAA 1860 0.4194 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVSPKVSETGLALEPTPNTITRHEEDLVLENKEAENILPGNQEIDSMGSVHQDAPVDPEKMRLEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVSTLCCMYEIVKLQALVRGGRVRQSDVGFEIREKCNLLKPLDGKLVNPIAISTEIMKLSANAFIRKLLGSSTTIMALRLQYVRGDPNSVLSWLERWSTSHFWKPVPQPKKIRDAKSQRKQGNISVGDAQMSKSKRTHRKLPTANFDSVPAQANPEFEKPKRNIRKIPSQPTDPVQENPQAQPPTANSDSIPVQANPEFEKPKRNIRKIPSQPSEPVQENPQSELEKVKRSLRKVHNPVVENAVLSEIESETPKLHLEKETVTLSLGVSEQGVISSNEKVKKDATLTISSASDVGITPRHSVSKEVYETPGSNQVTVELQPLTEITSKDKNISDDEVKHEPEDLPETIYKDENSHLTNGDMSHKEDPTGSENQKPTRKASIVAKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNSHGRRHSLPSSTNSKISSHSPRTQRPVQAGGKGGQRSDKTVSTSRDANGER. 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01415 619 MobiDBLite consensus disorder prediction 309 334 - -
Seca11g01415 619 MobiDBLite consensus disorder prediction 468 490 - -
Seca11g01415 619 MobiDBLite consensus disorder prediction 496 512 - -
Seca11g01415 619 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Seca11g01415 619 Gene3D - 96 146 - -
Seca11g01415 619 MobiDBLite consensus disorder prediction 427 619 - -
Seca11g01415 619 MobiDBLite consensus disorder prediction 245 370 - -
Seca11g01415 619 MobiDBLite consensus disorder prediction 574 593 - -
Seca11g01415 619 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Seca11g01415 619 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Seca11g01415 619 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Seca11g01415 619 Pfam Protein of unknown function (DUF4005) 525 605 IPR025064 -
Seca11g01415 619 MobiDBLite consensus disorder prediction 446 467 - -
Seca11g01415 619 PANTHER IQ-DOMAIN 5-RELATED 1 585 - -
Seca11g01415 619 SMART iq_5 121 142 IPR000048 GO:0005515
Seca11g01415 619 SMART iq_5 98 120 IPR000048 GO:0005515
Seca11g01415 619 MobiDBLite consensus disorder prediction 527 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01415 Seca-Chr11 15520493 15529202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01415 1 617 IQD Protein Family AT1G74690 41.680 9.13e-120 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01415 - - lja:Lj0g3v0315489.1 951.814