Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01384 ATGGCCACCGTCACCACACAAGCTTCTGCCAACCTTTTCAGGCCATGTGCCTCCAAATCAAGGTTCCTTACAGGCTCTTCTACTAAACTAAACAGGGAAGTGGCTGTTAGTTTTAGATCAATGGGGTCTCCTTCATTTACCTCTTTCAAGGTTCAAGCCAAGAAAGGGGAGTGGTTACCAGGCTTGGCCTCCCCATCTTACCTCAATGGCAGTCTTCCTGGTGACAATGGATTTGATCCTCTGGGGCTTGCTGAGGACCCAGAGAACTTGAAGTGGTTTGTTCAAGCTGAGCTTGTCAATGGACGTTGGGCTATGTTGGGTGTTGCAGGAATGTTACTTCCTGAAGTCTTCACCAAAATTGGTATTATCAATGTCCCCAAATGGTATGATGCTGGGAAAGAAGAGTACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAGGACATTAAGAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAGCAGTACAGTTTACCCCCAAATGAGGTTGGATACCCTGGTGGCATTTTTAACCCCTTGAATTTTGCACCTACCATGGAGGCTAAAGAGAAGGAAATTGCCAATGGGAGACTGGCAATGTTGGCATTCTTGGGATTTCTGGTTCAGCACAATGTGACAGGCAAAGGACCATTTGACAACCTCTTGCAGCATCTCTCAGACCCATGGCACAACACCATTGTCCAAACATGGAGCGGCAACTAA 765 0.4601 MATVTTQASANLFRPCASKSRFLTGSSTKLNREVAVSFRSMGSPSFTSFKVQAKKGEWLPGLASPSYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTMEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLSDPWHNTIVQTWSGN. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01384 254 Pfam Chlorophyll A-B binding protein 65 224 IPR022796 -
Seca11g01384 254 FunFam Chlorophyll a-b binding protein, chloroplastic 65 244 - -
Seca11g01384 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 250 IPR001344 GO:0009765|GO:0016020
Seca11g01384 254 Gene3D Chlorophyll a/b binding protein domain 65 244 - -
Seca11g01384 254 SUPERFAMILY Chlorophyll a-b binding protein 55 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01384 Seca-Chr11 14855329 14856485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01384 58 247 Chloroplast and Mitochondria Gene Families AT3G61470 57.653 2.28e-76 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01384 K08910 - rcu:8263414 477.248