Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01372 ATGAGAATTCAGAATAAAGGGGTAGTGAAGCTTCCATCAATTTCTTACCTTTCCATTCTTTTCCTTATCCCCTTTAGCCTTGCTAATTATGCTTCTTCTGCCACTGAATCTTCTTTCTCCCCTCCTGTTAATTATCTCATTGATTGTGGCTCTTCAACCCATACTCAACTCAAAGATGGTAGAACCTTTAAATCTGATCGTGAAACCACTTCTCTTTTATCCATAACTGAAGATTTGCAAATTTCAGTTGATTCCCTTAACATAAGTGTTTCTCCTTCTGTGCCTTCTTCATCAGTGCCTTTGTATAAGAGTGCTAGAGTTTTCACAGAGGAATCTACATACACTTTTTACATCTCCAAAACTGGTAGACTTTGGATTCGCCTATACTTCTTCCCTCTCTCTCACCCTTCTTATGATCTAACTAGTGCTGTTTTCTCTGTCCAAACTGATCACTTTGTGCTCTTGCATGAGTTCTCTGTGAGGAACAATGACTCACTTGTTTTCAAGGAATATCTTGTTAATGTTTCTTACAGTAGATTTTCCCTCAAATTTAAGCCTACGAAAAAGTCTTTTGCATTCATCAATGCCATTGAGGTTGTCTCAGCCCCTGACACTCTTATATCTGATTCAGCAACTGCAATTTCTCCACTTAGAGAATTCAAAGGGTTATTACAATCTGCTCTACAAGTATCCTATAGGGTAAATGTTGGTGGCCAAGCTATAACACCTGATAGTGATACCTTGTCAAGAACATGGGAACCTGATAGCTCATATAATATTTTCCCACAAGGCTCTGAGAGTGTTGCTGTATCCAACAAAAGCATCAAATATCCACAAAATGGGGCTACTACACCTTTGATTGCTCCAAAATTGGTTTATGCAACTGCTGCACATATGAAGGATCCTAGAGTTATGGAACCCAATTTCAATCTCAGTTGGATGATGAATGTGGAAAAGAGCTACTCTTATTTGATAAGAATGCACTTTTGTGACATTGTGAGCATAAGTCTTAATCAATTGTACCTCAATGTATACATCAATGGGATTGAGGGTGTGTCAGCTTTAGACCTTTCATCTCAAACCAAATCTCTAGCCACTGCCTATTATAAGGACTTTGTGGTTAGTGCATCTGCTATCACAAATGGTTCCATCTTGGTTCAGGTTGGACCAGCTAATCTCCAACAAGGTACTTCCAATGCAATTCTGAATGGAATTGAGGTGATGAAAATGAGCAACAATGCTGATAGCTTAGATGGTTTCTTTTCTGTTGATGGGAAATACAAAGGACCAAGTTCAACATGCACATCATTGAAAATTGCTGCTAGTGTTGGTTTGGGATTGGCTCTAACAGCAATGGTTTTGCTAACAATTATTTTTATAAGGTGGCTAAGGAGACCTCATGGTTGGGAAGAGCACAAACGTTTCTCATCATGGCTCCTCCCTATAAATTCAGGATGTAAAACTAGATTGTTTTCATGCAAAAGCACCTCTCAAAACTCAAGCACATTTGGTTCCCACAAGAGCAACAATCACTCCCCAAGAGGGCCTGAAAAGTTCTTTCCTTTCATTGAATTACAACAAGCCACACAGAACTTTGATGAAAAGAGAGTAATTGGTGTTGGAGGCTTTGGGAAAGTTTACCTTGGAACATTGAGAGATGGAACAAAAGTTGCTATAAAAAGAGGAAATGCTAGTTCAGAACAAGGCATCAATGAGTTCAGAACAGAATTAGACACACTTTCAAAGCTACGCCATCGCCACCTAGTCTCACTAATGGGGTTCTGTGATGAAAACTCAGAGATGGTTCTTGTATATGAGTACATGTCTAATGGCCCATTTCGTTCCCACCTTTATGGTTCCAATCTACCTCCTTTGTCATGGCAAAAAAGGCTTGAAATATGCATTGGTGCTGCTCGTGGATTGCATTATCTTCACACTGGTGCAGCTCAAAGTATCACACACCGTGATGTGAAGACAACAAATATCCTCTTAGATGAAAACTATATTGCAAAAGTTTCAGACTTTGGTTTATCAAAAGTTGTCCCAGAGAAAGCTCAAGTGAGCACTGCTGTGAAGGGTAGTTTTGGATACCTTGACCCTGAATACTTCAGGAGCCAACAACTAACACAAAAATCTGATATTTACTCTTTTGGGGTAGTCCTCATTGAGGTGCTATGTGCTAGGCCAGTTGTTTGCCCAACACTGCCAAGGGAACAAGCTAATTTAGCTGATTGGGCAATGAAACTTCACAGAATAGGCATGCTTCATAAGGCAATTGATCCTCACATTGTTGACACTATAAGTCCTGAATCTTTCAAGATTTTTGTGTTAGTTGCTGAGAAATGTCTAGCAGATCATGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTAGAACATGCTTTGCAGATACAGGTAGCTGCTTCACAGATTAATGCAACTAAAAGCACATGTCCAAATTCTTTTCAACAACCAAATGATTATGATAATATAGAATATCACTCAGGTGATCCCACAAGTGATGTGTCTGAGATTACAAATGATAATTATGTTCTGTTTTCTCAGATGGTTAATTTTAATGGAAGGTAA 2595 0.3915 MRIQNKGVVKLPSISYLSILFLIPFSLANYASSATESSFSPPVNYLIDCGSSTHTQLKDGRTFKSDRETTSLLSITEDLQISVDSLNISVSPSVPSSSVPLYKSARVFTEESTYTFYISKTGRLWIRLYFFPLSHPSYDLTSAVFSVQTDHFVLLHEFSVRNNDSLVFKEYLVNVSYSRFSLKFKPTKKSFAFINAIEVVSAPDTLISDSATAISPLREFKGLLQSALQVSYRVNVGGQAITPDSDTLSRTWEPDSSYNIFPQGSESVAVSNKSIKYPQNGATTPLIAPKLVYATAAHMKDPRVMEPNFNLSWMMNVEKSYSYLIRMHFCDIVSISLNQLYLNVYINGIEGVSALDLSSQTKSLATAYYKDFVVSASAITNGSILVQVGPANLQQGTSNAILNGIEVMKMSNNADSLDGFFSVDGKYKGPSSTCTSLKIAASVGLGLALTAMVLLTIIFIRWLRRPHGWEEHKRFSSWLLPINSGCKTRLFSCKSTSQNSSTFGSHKSNNHSPRGPEKFFPFIELQQATQNFDEKRVIGVGGFGKVYLGTLRDGTKVAIKRGNASSEQGINEFRTELDTLSKLRHRHLVSLMGFCDENSEMVLVYEYMSNGPFRSHLYGSNLPPLSWQKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKVVPEKAQVSTAVKGSFGYLDPEYFRSQQLTQKSDIYSFGVVLIEVLCARPVVCPTLPREQANLADWAMKLHRIGMLHKAIDPHIVDTISPESFKIFVLVAEKCLADHGVDRPSMGDVLWHLEHALQIQVAASQINATKSTCPNSFQQPNDYDNIEYHSGDPTSDVSEITNDNYVLFSQMVNFNGR. 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01372 864 Pfam Protein tyrosine and serine/threonine kinase 535 727 IPR001245 GO:0004672|GO:0006468
Seca11g01372 864 FunFam Receptor-like protein kinase FERONIA 227 412 - -
Seca11g01372 864 ProSiteProfiles Protein kinase domain profile. 532 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01372 864 SMART serkin_6 532 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01372 864 FunFam Receptor-like protein kinase FERONIA 608 822 - -
Seca11g01372 864 Pfam Malectin-like domain 47 410 IPR024788 -
Seca11g01372 864 FunFam receptor-like protein kinase FERONIA 493 607 - -
Seca11g01372 864 FunFam Putative receptor-like protein kinase 44 203 - -
Seca11g01372 864 Gene3D Transferase(Phosphotransferase) domain 1 608 822 - -
Seca11g01372 864 PANTHER OS07G0166700 PROTEIN 519 807 IPR045272 GO:0004714|GO:0006468
Seca11g01372 864 Gene3D Phosphorylase Kinase; domain 1 493 607 - -
Seca11g01372 864 CDD STKc_IRAK 538 801 - -
Seca11g01372 864 SUPERFAMILY Protein kinase-like (PK-like) 515 802 IPR011009 -
Seca11g01372 864 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Seca11g01372 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Seca11g01372 864 Gene3D - 227 412 - -
Seca11g01372 864 Gene3D - 42 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01372 Seca-Chr11 14731464 14734079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01372 35 817 Receptor kinase-like Gene Family AT5G61350 60.576 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca11g01372 Malectin_like 6.5e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01372 - - gmx:100814982 1241.1