Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01370 ATGGCGCTGTTCAGAAGATTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGATGAATACAGAGATTATATGGGGGGAATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTGTTCAACTTCAAAGAAGGGGATAGACGCAGCCAAATCTCAGACATATTTTCTCAATATGACATGACAGTTATGGAGTATCCTCGGCAATATGAGGGTTGTCCCCTTCTTCCTTTAGAAATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAGAATGTACTCTTGATGCACTGTGAAAGGGGAGGTTGGCCTGTGCTGGCATTTATGCTAGCAGGTCTTCTATTATATCGGAAACAGTACAGTGGGGAGCAAAAGACTCTTGAAATGGTCCACAAGCAAGCTCCCAGAGAACTACTACACCTTTTATCTCCTTTGAACCCACAGCCTTCTCAGTCTAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCACCGTCAGAAACACCCTTGTATTTGGATTGTCTAATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATAGTCCAGACCCTTCAAAACCTGCCAACAGAAGTTCAAAGCTGCTTTTTTCAACTTCAAAATCCAAAAAACATGTTCGCCACTACACACAGGCAGAGTGTATGCTCGTGAAAATCGATATCCATTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAATGAAGATTTTATGCGTGAGGAGATGATGTTTAGAGTTATGTTCCATACTGCATTTGTGCGGTCAAATACATTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCCAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAAACACAGCCACGGTGAGTGAAGATGCAAATGAGACTGAAAGTGCTGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGCAATTGATGCACAGGAAGAGAAGGCAGAGTATGATTCCCATGCTTTTCCTGACAATGCAGTGGATGATGAAAATCATAAAGAGGTCTGGAAGGAAGAGTTGGATCCTCCTACTTTTCAGGACTGTACACCAGATGATGGGATTCACAAACAAGTTGGCAAGATGGATTCTGGTATTAGTGTGGTGAAAGATATCTCTGTTGATGATGTGAACTACAAGTTCAATGAGAACATGGATTCAGATCCTCATGCAGTAAAGGACATTGCCGTGGATGATGGAGAAATTAAGTCAACTTTCACTGCAGTCACTTCTGATATGATGAAGCCTCTAGAAACAAAGGAAGTCACTGTGGATGTGCACCAGGAATTAGCAATTATGCAAAACAAATGTGATGAAGACAATGAAGCAACAGAAAAGGAATTAGACTCCAAGGAAGGGCTGCAGATGCCTGATAATTCCAAACAAAATTCTGGTAAACTACTTCCATCTACTGCCAAGAAACAACTTCCATCAAACTCAAAGCCAGTCGGAGACACCTTGGTAGCAAAACAAAAGAATAAACAGCAAGAAACCAATGGTGGTTTTCAGGCAAAACAAGCTAAGCCCACTGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCAATGCATGTCTATTATCCACCATCAAGGTATAATAGTGCACCGGCTGCACTGTCAAATCTTACCTCTACAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCCGTTGTCTCTGCATCTGTTGTTTCTATGGACATGAAAAATGACCTGAAAAGTCGTAAGTTTGCTACTTCAAAATCTTCTGGCTACATAGTAGCAGAAATAGATGCAAAACATCCACCATCACCATCACCATTACCATCAATTAAAGAGCTTCAGTCGGCTACTCAAGCACAACAACAGAGCTCAGAGCAAGTGCTACAGCCCCCCCAACCGTCTCCCCCTCCATCTCCATCTCATGCTAGTAACTCTTCACATATTTTTGAACCCTTATCATTACAGGAGGATGTATCACTTCAAGCATCTCCATCACCACCAGTAACACCATCTTCTTTAGGTGGAAAAGGGTCCATTGCACCGCCACCTCCGCCTCCACCTCCACCACCACCACCACCACCACCACCGGTTTTTACATCATTTACTAGACAGAAAGTAAGTGAGAATTTAGAGCCTGCAACTTCTCCTTCTTCCTCTCCGCCCCCTCCTGCTCCTCCACCTCCACCTCCACCTCCACCTCCACCTCCATTTTTTGGGCAGAATAAAGGGAGCTTATTACATTCCCCATCCTCCTCCATTTCTGAAGTGCTTACTGCCGTGACCCCTTCAAGGCCACTGCCTCCTCCACCACCACCATTGCCTCCTCCAAAGTATGAAGTTTCATCCACTCCTCCTCCTATATATTTGACACGTACAACTCCAACCCCACCTCCACCTCCACCTCCCTTAACTAATTCAAATATAGGTTCACTGACACAACCTCTTTTTAGCAAAGCACCACCACCTCCGCCTTCACCTCCACCTCCACCTCCTTTTAGTGGTGCTCCACCACCACCACCACCACCACCTCCACCTCCACCTCCTTTTAGTAGTGCTCCTCCACCACCACCACCACCACCACCTCCTTTTAGTAATGCTCCACCACCACCACCTCCACCTCCTTTTAGTAGAGTTCCGCTACCTCCACCTTCATCTCTTTTTAGTAAAGCTCCCCCACCGCCGCCTCCACCTCCTTTTAGTAAAGCTCCTCCTCCTCCACCTCCTCCTCCTTTTAGTAATGCTCCTCCTCCACCACCTCCACCTCCTTTTAGTAATGCTCCTCCTCCACCACCTCCACCTCCTTTTAGTAAAACACCACCCCCACCACCTCCACCACCTTTTAGTAGTGCTCCACCACCCCCGCCTCCTCCATTGCATGGAGCTCCTCCCCCACCTCCCCCTCTTCCTTCATTAAGTGGAGCCCCACCGCCACCACCACCTCCTCCAATGTCTAGAGCCCCACCACCTCCACCAATACGTGGGGCACCACCACCACCTCCTCCTCCAATGCGTGGAGCACCACCACCACCACCTCCTCCAATGCATGGAGCTCCACCTCCACCACCACCTCCTGGTGGTCGAGGCCCACCTCCTCCTGGTGCTCGAGGTCCACCACCTCCACCTCTCCCAGGTGCTCCTAGACCTCCTGGTGGTGCACCTCCACCACCTCCGCCCTTAGGTTCCAAAGGTGCAAATGTTGGAGCTGATCCGAGAGGTAGAGGCCGTGGATATGCACGCCCCGCAGGAGCTGGTGCAGTGGCACCCCGTCGATCCTCCCTAAAGCCTCTACATTGGAGCAAGGTTACAAGGGCATTACAAGGAAGTTTATGGGAAGAATTACAAAGACACGGAGAACCTCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCGAATGTTCCAAAACCTGCTGATTCAAGTGGCAAATCTGGAGGGCGACGCAAGTCTGTTGGATCTAAAACTGACAAAGTCCACTTGATTGACCTAAGGAGGGCTAACAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGACATGATGGCTGCAGTTCTAGCTCTGGATGAGTCAGTATTAGACGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACAAAAGAGGAGATGGAACTTTTGAAGGGATACACTGGTGACAAAGAGAATTTGGGGAAGTGTGAACAGTATTTTTTGGAGCTTATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCTCTTTCAAAATTCAGTTTGGGTCTCAGGTTACAGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTGAAGGAGATCTTGAAGAAAATTCTTTTTTTGGGTAATACATTAAATCAGGGAACAGCAAGGGGATCTGCAGTTGGGTTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAGATCGCCTGGACTCCTTGATTTTCATCAAGACCTTGTTAGCCTGGAAGCTGCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAGCTTGCTGCATCTGAAAATGATGGACCTGTGTCTGAAGTTTTCCGTAAGACATTGAAAGGATTCATAACTGGAGCTGAGTCAGAGGTGACATCTTTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCTCTATATTTTGGTGAGGATCCTGCTCGATGCCCATTTGAGCAAGTTACTACAACTCTCCTAAATTTCATAAGGTTGTTCCGGAAAGCCCATGAAGAGAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCCGTGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCATCAACTTGACAAAGAAGAGTGCAAAAGATAGTTGA 4719 0.4577 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRDYMGGIVAQLQDHFPDASFMVFNFKEGDRRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVHKQAPRELLHLLSPLNPQPSQSRYLQYISRRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYSPDPSKPANRSSKLLFSTSKSKKHVRHYTQAECMLVKIDIHCRVQGDVVLECIHLNEDFMREEMMFRVMFHTAFVRSNTLMLSRDEIDILWDAKDQFPKDFKAEVLFLDADAVIPDLNTATVSEDANETESAETESASPEEFYEVEEIFSNAIDAQEEKAEYDSHAFPDNAVDDENHKEVWKEELDPPTFQDCTPDDGIHKQVGKMDSGISVVKDISVDDVNYKFNENMDSDPHAVKDIAVDDGEIKSTFTAVTSDMMKPLETKEVTVDVHQELAIMQNKCDEDNEATEKELDSKEGLQMPDNSKQNSGKLLPSTAKKQLPSNSKPVGDTLVAKQKNKQQETNGGFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPSRYNSAPAALSNLTSTKEKMEDAKTRSLSAPVVSASVVSMDMKNDLKSRKFATSKSSGYIVAEIDAKHPPSPSPLPSIKELQSATQAQQQSSEQVLQPPQPSPPPSPSHASNSSHIFEPLSLQEDVSLQASPSPPVTPSSLGGKGSIAPPPPPPPPPPPPPPPPVFTSFTRQKVSENLEPATSPSSSPPPPAPPPPPPPPPPPPFFGQNKGSLLHSPSSSISEVLTAVTPSRPLPPPPPPLPPPKYEVSSTPPPIYLTRTTPTPPPPPPPLTNSNIGSLTQPLFSKAPPPPPSPPPPPPFSGAPPPPPPPPPPPPPFSSAPPPPPPPPPPFSNAPPPPPPPPFSRVPLPPPSSLFSKAPPPPPPPPFSKAPPPPPPPPFSNAPPPPPPPPFSNAPPPPPPPPFSKTPPPPPPPPFSSAPPPPPPPLHGAPPPPPPLPSLSGAPPPPPPPPMSRAPPPPPIRGAPPPPPPPMRGAPPPPPPPMHGAPPPPPPPGGRGPPPPGARGPPPPPLPGAPRPPGGAPPPPPPLGSKGANVGADPRGRGRGYARPAGAGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPADSSGKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQVTEFKKSLNTVNSACEEVRKSVKLKEILKKILFLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHQDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQELAASENDGPVSEVFRKTLKGFITGAESEVTSLTNLYSVVGRNADALALYFGEDPARCPFEQVTTTLLNFIRLFRKAHEENCKQAELEKKKAVKEAEMEKAKGINLTKKSAKDS. 1573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01370 1572 SMART it6_source 616 1572 IPR015425 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 349 369 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 817 833 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 890 1135 - -
Seca11g01370 1572 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 188 IPR029021 -
Seca11g01370 1572 Coils Coil 1439 1466 - -
Seca11g01370 1572 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Seca11g01370 1572 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1093 1550 - -
Seca11g01370 1572 SMART PTEN_C2_2 198 338 IPR014020 -
Seca11g01370 1572 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 836 856 - -
Seca11g01370 1572 FunFam Formin-like protein 1156 1544 - -
Seca11g01370 1572 PANTHER FORMIN-J 1070 1567 - -
Seca11g01370 1572 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 669 1164 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 528 592 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 715 746 - -
Seca11g01370 1572 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1157 1558 IPR015425 -
Seca11g01370 1572 Coils Coil 1533 1562 - -
Seca11g01370 1572 Pfam Formin Homology 2 Domain 1163 1532 IPR015425 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 508 527 - -
Seca11g01370 1572 Gene3D - 205 336 - -
Seca11g01370 1572 Gene3D Formin, FH2 domain 1159 1544 IPR042201 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 751 773 - -
Seca11g01370 1572 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 774 788 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 683 702 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 508 592 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 1210 1232 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 789 813 - -
Seca11g01370 1572 MobiDBLite consensus disorder prediction 863 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01370 Seca-Chr11 14706255 14719998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01370 1 640 FH2 protein (formin) Gene Family AT5G07740 62.328 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01370 - - gmx:100785475 1177.16