Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01310 ATGGCAGCCAAGCTGTTGCATTCTTTAGCAGATGATAACCCAGATTTACAGAAGCAAATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCATATTATCACTACTCGCCGCATTAGCCAGAAGAGGCTTCCTCCTGGTAATTCCCACTTCAATTATGACAGCCTGCAAAGAGATTCTAATGGCATACACCAACGAAAAACAACAGCTGATATCAGCTTAAACAAGGGTGTGAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGAGCCTCATACTCTTCTTCTTGTTCATCATCAATGTCCCCTAAAGCTCAAGCAGATACTCCTGTTGACCGGATCATTTTTCCTGAAAATTCTATGAGAGACCCAGTTATGAACCTAAAAAGTACCTCTCCCCATTTAGGAAGTCACTCCCTTGACCTGAGGGATGTTGTGAAGGACTCTATGTATAGAGAGGCCAGAGGACTATCCAAAGAGAAAGCTTCCATTCGTGCTATGAAGCACAAGGATTCCCCAAGACCTCTTCAGCTTTCCAAATCTCTCAATGGAAAACAAAGTGTGCCTGTTGATCTAAAGGAGTCTATTCAAGTCCTTACTAAACTTAGAGAAGCACCTTGGCATTATGGTGAAGCTAAAGAACTTCCAAGATCATCATATGAAGTAAAAGATGGACAATGGCATTCAATCTCAAAGGATGCTCCTCGGTATTCTTATGATGGAAGAGGAACAAGTCGTTTGTCTTTTGAATCACCTGATACCACCAAATGTGCACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTTGACAGTAGGGAAAGTTCATGGCGCACATACAGCTATGATTCAAAAGCTAGTCACCTCTCAAGAAATTTCAGTACTGGTGGAGCCTCAACCTCAGATGACAAAATCTCTAGTCTACAACAGTTTTCAGCAAGCCAGAGCCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCATTGCCAGAATCCTATTTGGTCAGTGATACTCAGTCAGGTTTGAGTGAAACTGGCTCAACTCATGGTAATGATCAGTTTTCAAAAGATGGACTCACAAGACCACTTAGAGTTTCTAATTCCCTAAAAGGCTCATTGAAAGACCCCACTTCCCCACAGAGGAAGAATCCTGATTTGGTTGTGAAACCCATCTCAAGTTCAAGGTTTCCTATTGAACCAGCACCATGGAAGCAGAAGGATGGAATTCAAAGCTCTAAGAAACAAAGTTCAAGGGCCATAAAGGCTCCAGCTAGAACACTGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGATGAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTAAAACGGATATTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACCAAGAAAGAGGAACAAGCTCCCAATGATGTTGGGAATCAAAGATTCTATGAATCAAAATTTAGTCTAATTCAGGATTCTATGTCAGTGAGGCAACAAACAATCAGAGGGTCTGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATCATGAAACCAGCAAAACTTGTAGGTAAAACTGGAGTTTCTGCTACTTCAGTCATTCCAATTGGTGGACTTTCTGATTCCCATAAATTCCTCAGTGGTGGTGTACATGAACATATGAAAAAAGGGACAGCTTCTGGTCAAATAGCAAAAGATCAGTCTCCTAGAAACAGTCGCAGGGATGCTTCTACCAGTTCTAGTGATAAGAAAGCAAGTAGTAGTAAGACTATAAGATCAGCACAATCTCAGCCAAGGTCTCAACAATTTGCAAAAGAAAATAACTCAAGTTCAGTAAAGATTTCAGGATCTGTGAGCCCAAGAATGCAACAGAAGAAATTAGAGCTGGAGAGGAGATCTCGCCCACCTACCCCACCATCAGATTCAAATAAAACCAGAAGGCAATCCAGTAAACATACAACAGAATCAGATTCTCCTGGTAGGAAACTGAGACGTAGAGTCCCTCATTCACAGCATAGTGATGACCAACTTAGTGAGATAAGCAATGAATCAAGAAGTGTAAGTTGCCAAGAGGATGAAATATCTATGCAATCAGATAGTATAACTGTGGACTCGAAGATGGATATGGAAGTCACCAGCAGTTCAATATCTGCTGAAATTATTGATGGCCAAAGCCCATCTATGGAAGCTATTGAGCAGTTGGTTTCAGGATCAATGAAGAAGAATTCAACTCTGAGGATGGATGAGGATGACTCATCTGCAGAACTTGCAACAGATGCCCCAGATCATCCAAGCCCTATTTCAGTTCTTGATGTCTCAGAATACAAAGATGACGTGCCATCCCCTGTGAAGCTTATATCCAATGCTCACAAAGCTGGTGATGCTCAAGAATCTAAAGAGGAAGAGAATAAAGATCATTGGAACCCTGCAGATAGCCTTTCAGTTAACAGCACAGGATCTGGAGAGATCAACCGCAAGAAATTGCAAAGCATAGATCACCTTGTTCAGAAGCTTAGACGGCTAAACTCAAGTCATGATGAAGCTAGAATTGATTACATAGCTTCCCTATGTGAAAACACAAGTCCAGACCACAGATACATCTCGGAAATACTATTAGCTTCAGGTCTACTACTCAGAGATCTGAGTTCAGAATTTCTGACATTTCAACATCACTCATCAGGCCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAGGGAAGTAGTTTTCTTTCAAAAGAAGAAATCATCCTTGAAAAAGCTTCTTACATGAAGCTAAATTCAGAGAAGTTTCACAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTGGTGCAAAATTAGGCTCTTCACCTGAGCCATGGTTGAAGCCTAATGGACTCACAAAGAAAATCCTCAATGCACAAAAGCTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATTCAATCCAAAAAGCCAGAGTGCAGTTTAGAAGATGAAGGGGATGAACTGAAAAGTGTGCTATGGGAAGATGTGATGCATGGCTCAGAAAGCTGGACAGATTTCAACTGTGAAATACCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTTAATGAAATTGTGATTGGTGAAGCAGAAGCAGCTAGTTTGCGATTCAAGTCAGTTAGACGCAGGAAGCTGTTTGGAAAGTAG 3219 0.4104 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHIITTRRISQKRLPPGNSHFNYDSLQRDSNGIHQRKTTADISLNKGVSEKQRISTESSRASYSSSCSSSMSPKAQADTPVDRIIFPENSMRDPVMNLKSTSPHLGSHSLDLRDVVKDSMYREARGLSKEKASIRAMKHKDSPRPLQLSKSLNGKQSVPVDLKESIQVLTKLREAPWHYGEAKELPRSSYEVKDGQWHSISKDAPRYSYDGRGTSRLSFESPDTTKCAPKLKELPRLSLDSRESSWRTYSYDSKASHLSRNFSTGGASTSDDKISSLQQFSASQSRPPSVVAKLMGLEALPESYLVSDTQSGLSETGSTHGNDQFSKDGLTRPLRVSNSLKGSLKDPTSPQRKNPDLVVKPISSSRFPIEPAPWKQKDGIQSSKKQSSRAIKAPARTLDSFPSVYSEIEMRLKDLEFKQSGRDLRALKRILEAMQVKGLLETKKEEQAPNDVGNQRFYESKFSLIQDSMSVRQQTIRGSDSARTFESPIVIMKPAKLVGKTGVSATSVIPIGGLSDSHKFLSGGVHEHMKKGTASGQIAKDQSPRNSRRDASTSSSDKKASSSKTIRSAQSQPRSQQFAKENNSSSVKISGSVSPRMQQKKLELERRSRPPTPPSDSNKTRRQSSKHTTESDSPGRKLRRRVPHSQHSDDQLSEISNESRSVSCQEDEISMQSDSITVDSKMDMEVTSSSISAEIIDGQSPSMEAIEQLVSGSMKKNSTLRMDEDDSSAELATDAPDHPSPISVLDVSEYKDDVPSPVKLISNAHKAGDAQESKEEENKDHWNPADSLSVNSTGSGEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTSPDHRYISEILLASGLLLRDLSSEFLTFQHHSSGHPINPELFLVLEQTKGSSFLSKEEIILEKASYMKLNSEKFHRKLIFDTVNEILGAKLGSSPEPWLKPNGLTKKILNAQKLLKELCFEIEKIQSKKPECSLEDEGDELKSVLWEDVMHGSESWTDFNCEIPGVVLDVERLIFKDLVNEIVIGEAEAASLRFKSVRRRKLFGK. 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01310 1072 PANTHER LONGIFOLIA PROTEIN 1 1070 IPR033334 GO:0051513
Seca11g01310 1072 MobiDBLite consensus disorder prediction 588 629 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 79 108 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 800 815 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 156 184 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 796 828 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 652 686 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 750 764 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 559 706 - -
Seca11g01310 1072 Pfam DUF761-associated sequence motif 314 336 IPR032795 -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 340 425 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 687 706 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 156 177 - -
Seca11g01310 1072 Pfam Domain of unknown function (DUF4378) 870 1048 IPR025486 -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 43 61 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 746 776 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 340 382 - -
Seca11g01310 1072 MobiDBLite consensus disorder prediction 41 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01310 Seca-Chr11 13988811 13995007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01310 136 1071 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 49.175 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01310 - - gmx:100787391 1379