Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01304 ATGTCATCAGAACTCTGTTCCATGTTCTTTCAACCACCTTCATGTTCAACCATACTCACTTTTGATGTCTTTCTTGGTCTCCTTTTCCTCATAGTTGTGTTTGGCTACTTACTAGTTCCTGGTGGTCTTGCTTGGGCTCTTTCAAGGCTCCGTTTGGAGCCACCAAAAACAGTAACTGGCAACTCTGTTGTTGTTATTCCTGGACCTTCAGGAATTCCTGTGCTTGGTCTAGTTTTAGCTTTCACAGGGACTTTGACTCATAGAGTCCTTGCTAAGCTTGCAGATACCTTCAAGGCTAAACCTTTGATGGCATTCTCAATTGGGTTTACTCGTTTTGTAATCTCCTCTGAACCTGACACTGCTAAAGAGATTTTGAACAGTTCATCTTTTGCGGATCGTCCTGTTAAGGAATCTGCTTATGAGCTTCTCTTTCACAGAGCAATGGGGTTCGCACCGTATGGTGAGTACTGGAGGAACCTGAGGAGGATTTCTGCTACTCACATGTTCTCTCCTCGGAGGATTGCTTCTTCTGGGGAGTTTAGGGCCAGGGTTGGGGCATGGATGGTGAGGGAGATTAAGGGGTTGGTGGAAAAGAAGCAGGGTGAGGTGAAGGTAAAGGAAGTGTTGCATTTTGGGTCATTGAACAACATGATGATGAGTGTGTTTGGGAGGAGTTATGAGTTTGGTGAGAGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGGGAAGGGTATGATCTGCTTGGGGTTTTCAATTGGAGTGATCACTTCCCTCTCTTGGGTTGGTTGGACTTGCAAGGTGTGAGAAGGAGGTGTAGAAATTTGGTGAATAAAGTCAATGTTTTTGTTGGGAAAATCATATGGGAGCATAGGATGAAAAGGGTTGATAAAGGTGAAGAAGATAGGACCGTAATCATGGATGAGAGCTCTGGTGATTTTGTTGATGTGCTTCTAGATTTGGAGAAAGAGAACAGAATTCAACACTCTGATATGGTTGCTATCTTGTGGGAAATGATCTTTAGGGGGACAGATACAGTAGCAATCCTTCTAGAGTGGATACTTGCTAGGATGGTTCTACACCCAGAAGTCCAATCTAAGGCTCAGTCAGAAATTGACTCTGTTGTTGGCTCTGGCCGCACTGTGAATGACATGGATCTTCCCAACCTTCCTTACCTACATGCCATAGTGAAGGAAACCTTAAGGATGCATCCACCAGGTCCCCTTCTTTCTTGGGCCAGGCTTGCCATCCATGACACTCACATAGGCCACCACTTCATTCCAGCTGGCACTACTGCCATGGTCAACATGTGGGCCATCACTCATGACCAACAAGTTTGGTCTGATCCACAACAATTCAAACCAGAGCGTTTTCTGCATGAGGAAAATGTGCCAATTATGGGGTCTGATCTTAGGCTAGCACCTTTTGGTTCTGGAAGAAGAGTGTGCCCTGGAAAAGCATTAGGCTTAGCCACTGTTGAGCTTTGGCTTGCTATGTTCCTACAGAGTTTCAAATGGATGCCTTGTGATTCTGGTGTGGACTTGTCTGAATGCTTGAAGCTCTCTTTGGAGATGAAATGCTCTTTGGTTTCTAAAGCTGTGATACGCACTCCAAGTTGCATACATCAAGAATGA 1632 0.4516 MSSELCSMFFQPPSCSTILTFDVFLGLLFLIVVFGYLLVPGGLAWALSRLRLEPPKTVTGNSVVVIPGPSGIPVLGLVLAFTGTLTHRVLAKLADTFKAKPLMAFSIGFTRFVISSEPDTAKEILNSSSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPRRIASSGEFRARVGAWMVREIKGLVEKKQGEVKVKEVLHFGSLNNMMMSVFGRSYEFGESGDGCELEELVREGYDLLGVFNWSDHFPLLGWLDLQGVRRRCRNLVNKVNVFVGKIIWEHRMKRVDKGEEDRTVIMDESSGDFVDVLLDLEKENRIQHSDMVAILWEMIFRGTDTVAILLEWILARMVLHPEVQSKAQSEIDSVVGSGRTVNDMDLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTHIGHHFIPAGTTAMVNMWAITHDQQVWSDPQQFKPERFLHEENVPIMGSDLRLAPFGSGRRVCPGKALGLATVELWLAMFLQSFKWMPCDSGVDLSECLKLSLEMKCSLVSKAVIRTPSCIHQE. 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01304 543 PANTHER CYTOCHROME P450 78A7-RELATED 19 535 - -
Seca11g01304 543 CDD CYP78 98 528 - -
Seca11g01304 543 Gene3D Cytochrome P450 58 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 FunFam Cytochrome P450 78A5 58 535 - -
Seca11g01304 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Seca11g01304 543 Pfam Cytochrome P450 67 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 SUPERFAMILY Cytochrome P450 66 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01304 543 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01304 Seca-Chr11 13899134 13902221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01304 1 535 Cytochrome P450 AT1G74110 63.853 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01304 K20619 - gmx:100811042 827.009