Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01298 ATGCTAATGCCATTTTCAGTGTTTGATCATGCAGAAAAAGGTGATGCATTAAATGCAATGGAACTTGCTTTGTCTTTGGAATGGTTGAACAATGAGAAGCTTCTAAATTTACACAGTGTAGTGGAAGACATTAAAAAGATCTCAGAATATGTTGCTCAGTTAAGAAGGGTGGGCAAAGGACATGTTTTTTCTGTTGCTGCCGCTGTATGCACATTTAAGAAGAAAGCCCCAAAAGCAATTAAGGAGATAAGGAAATTTGCCCAGAAAGCAATGGGAACCAATGATGTGATGGTGGATGTGAAGCTGAACAAGTATGTCTGGAGCCAGGGAATCCGAAGTGTTCCAAGGAGGATTAGGGTAAGGTACGCATTGCTCGCAAGAGGAATGATGATGAAGATGCCAAGGAAGAGCTATACTCCCTTGTTACAGTTGTTGAAATCCCTAAGGAAGAGCTCAAGGGGTTGGGCACTAAGGTCATTGATGATGAGGATTGATTTATCATATATCTTTTTGAACCCTGGAGACATATTTGTACCTTTTTCTTTCCGCAATTGA 555 0.4054 MLMPFSVFDHAEKGDALNAMELALSLEWLNNEKLLNLHSVVEDIKKISEYVAQLRRVGKGHVFSVAAAVCTFKKKAPKAIKEIRKFAQKAMGTNDVMVDVKLNKYVWSQGIRSVPRRIRVRYALLARGMMMKMPRKSYTPLLQLLKSLRKSSRGWALRSLMMRIDLSYIFLNPGDIFVPFSFRN. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01298 184 PANTHER 60S RIBOSOMAL PROTEIN L31 69 123 IPR000054 GO:0003735|GO:0005840|GO:0006412
Seca11g01298 184 Pfam Ribosomal protein L31e 70 122 IPR000054 GO:0003735|GO:0005840|GO:0006412
Seca11g01298 184 CDD Ribosomal_L31e 49 121 IPR000054 GO:0003735|GO:0005840|GO:0006412
Seca11g01298 184 SMART Ribosomal_L31e_2 45 132 IPR000054 GO:0003735|GO:0005840|GO:0006412
Seca11g01298 184 Gene3D - 63 152 IPR023621 -
Seca11g01298 184 SUPERFAMILY Ferritin-like 6 62 IPR009078 -
Seca11g01298 184 SUPERFAMILY Ribosomal protein L31e 69 123 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01298 Seca-Chr11 13869451 13873542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01298 70 123 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 81.481 4.77e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01298 K02910 - gmx:100810835 104.76