Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01294 ATGCGATGCTCTTACCCTGCTTCAGTGTGTGGCATCTCACCCTGGACAAGGACGTTATTCCTCAATGCTCGCATACCTCTATATTTGTATCCCTTCCTTAATACGACAAGTAAGTCAAGACCATTTGAGCATTTGGGGCTTACTAGTCTCGATGTTATTAGTACCGTGGTGAAGGTTCATGATACAGAAGTGTAA 195 0.4359 MRCSYPASVCGISPWTRTLFLNARIPLYLYPFLNTTSKSRPFEHLGLTSLDVISTVVKVHDTEV. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01294 64 Gene3D - 8 64 IPR011989 -
Seca11g01294 64 Pfam Cell differentiation family, Rcd1-like 14 64 - -
Seca11g01294 64 PANTHER UNCHARACTERIZED 14 64 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01294 Seca-Chr11 13849699 13849893 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Seca11g01294 Rcd1 2.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01294 K12606 - nnu:104586177 82.4185