Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01292 ATGGAGTTTCTCTGTTTAGCAACTACTGGATCTGTTGTCCCCCGTGGTGGCTTCTTGGCAACGTTACTCCTCTTACTCCTCTCTTCCACCACTTTCACTTCTACTGAAGCCTATGATGCACTTGATCCAACTGGCAATATAACAATCAAATGGGATATCATAAGCTGGACTGGAGATGGCTACCTTGCTGTTGTTACCATGTACAACTTTCAACAGTATCGCCATATTCAGGCTCCTGGATGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAAGCCAAACCACAGAGCAAGGAGACTGTTCAAAGTTCAAAGGGAACATCCCACATTGTTGCAAGAAGGATCCAACAGTAGTGGATTTACTGCCAGGAACTCCTTACAACCAGCAGATTGCCAATTGTTGCAAAGGGGGAGTCTTGAACTCATGGGCTCAGGACCCAGAAACTGCAGTAGCTTCATTTCAAATTAGTGTTGGTTCTGCAGGAACAACTAACAAAACAGTCAAACTTCCCAGAAATTTTACCCTGAAAGCACCAGGGCCTGGTTATACTTGTGGCCCTGCAAAGGTTGTGAGACCAACTAAATTTATTACCAATGACAAGAGGAGAACCACTCAGGCTCTGATGACCTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAGAAGACCCCAACTTGCTGTGTTTCTCTCTCATCCTTCTATAATGATACAATAGTAAACTGCCCAACCTGCACCTGTGGCTGCCAAAACAAAACAGAACCTGGCAGCTGTGTAGATCCAAAGTCCCCACATATAGCTTCAGTTGTGTCACCACCAGGAAAAGCTATAAATACACCTCTAGTCCGGTGTACCAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCCAGTATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACAGAATGAACTATTCACAACGGAACCTTGTTGTGCAGCACCCAAATTTTGATAATCTAACCCAGATTTTCAGCTTTAATTACAAATCACTAACACCTTATGAGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTATAATGATTTACTTACTTCAGCTGGACCCCTTGGGAATGTACAGTCAGAGCTTTTATTTCGAAAGGACAAATCAACCTTCACATTTGATAAAGGATGGGCTTTCCCACGAAGAATTTATTTCAATGGTGATAACTGTGTAATGCCACCCCCGGATGCCTACCCATGGCTGCCAAATGCAAGTTCAAAACAAGTTTTCTCTTTACTAAGTACAGTGATAGGCACTTTAGCTTCTTTGGTAGTCTTACTGACTTAA 1365 0.43 MEFLCLATTGSVVPRGGFLATLLLLLLSSTTFTSTEAYDALDPTGNITIKWDIISWTGDGYLAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGSQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPETAVASFQISVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKVVRPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNKTEPGSCVDPKSPHIASVVSPPGKAINTPLVRCTSHMCPIRVHWHVKLQYKEYWRIKITITNFNYRMNYSQRNLVVQHPNFDNLTQIFSFNYKSLTPYEGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKQVFSLLSTVIGTLASLVVLLT. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01292 454 PIRSF COBRA 10 454 IPR006918 GO:0010215|GO:0016020
Seca11g01292 454 PANTHER PROTEIN COBRA 27 442 IPR006918 GO:0010215|GO:0016020
Seca11g01292 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01292 Seca-Chr11 13840280 13843690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01292 23 453 COBRA Gene Family AT3G02210 75.694 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01292 - - vun:114177145 871.307