Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01230 ATGGCCACTCTCTCCTTCAAAGCCTCATACCCATTTTTCCTTTGCTTGATTCTTTTCTGTGGCTCTCAAGTATTGCTTATCAATTGTACTGAATTTGAAGTTGGTGGTAAAGATGGTTGGGTTGTCCCAAAATCAAAGGACAATTCTGATATGTATAACCAATGGGCATCCCAAAACAGATTCAAAGTTAATGACACTGTTCGTTTCAAGTATGAGAAAGACTCTGTTATGGTGGTGACTGAAGAAGAGTATGGAAAATGCAAATCCTCTCGTCCTCTTTTTTTCTCTAACAATGGTGACACTATCTACAAATTTGATCGACCTGGCATGTTCTATTTCATTAGTGGGGTTAGTGGTCACTGTGACAGAGGGCAGAAGATGATCATTAAGGTTTTGAATGTAGAGCCAGCAGCACCTTCACCTCAATCTGCAAATGAGAGTGCACAGAAATCACCTTCTAATGGTGGAGTTGTTGGAATGGCTCCTCTGAGTATCACAACATTGACACTTTTTGTTTTGTCATTCTTGGCCCTGCTTTATGCTTGA 546 0.4029 MATLSFKASYPFFLCLILFCGSQVLLINCTEFEVGGKDGWVVPKSKDNSDMYNQWASQNRFKVNDTVRFKYEKDSVMVVTEEEYGKCKSSRPLFFSNNGDTIYKFDRPGMFYFISGVSGHCDRGQKMIIKVLNVEPAAPSPQSANESAQKSPSNGGVVGMAPLSITTLTLFVLSFLALLYA. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01230 181 FunFam Early nodulin-like protein 1 29 136 - -
Seca11g01230 181 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Seca11g01230 181 Pfam Plastocyanin-like domain 48 125 IPR003245 GO:0009055
Seca11g01230 181 Gene3D - 29 136 IPR008972 -
Seca11g01230 181 PANTHER BLUE COPPER PROTEIN 30 144 IPR039391 GO:0009055
Seca11g01230 181 CDD OsENODL1_like 30 132 IPR041846 -
Seca11g01230 181 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01230 Seca-Chr11 13190195 13191389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01230 13 173 Phytocyanin Superfamily AT1G48940 50.292 2.37e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01230 - - gmx:102667643 258.07