Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01223 ATGATTCCACCGCCGCCACGTCATCTCTCCGAGAAAACCGCCACCATACCCGTCCCGGAGTCTCCTTCTTCCGGCGACCGCCACGTGGCAATTGGCAGTTCCAATTTCCCTGGAGATTCGTCGCTACTGAACCCTCCGCAAAATCCAAGCCATGCTACTCGCATTGAAGAAAAGAGGGAAGAGAAAGAGGTTCTGCAATCAAGTTCGAAGCCGCTGAAAGCAAAAACTACAAAGGCTGAGAGACGAGCCTTGCAGGAGGCTCAACGAGCTGCTAAAGCTGCTTCTAAAGCTGAGGGAAGTAAAGCATTTGCTGAATCTGGGAGAGCAGCCCCAGGTAAAAATACGAAGCAGACTTCACAAAAGAAAGATGGTCCTCCCTCTACATCTCCAGTGGCTACTGATAAGAAAACAGGAGATCATCCTTTGGGGAAAGATAGGAAAAAGGAGGCTCCTCCTCCGAGAATGCAATTTGATGACAAAAAACGAGTGGAAAAGGCTAAAAGGCGTTCAGTAGTGAATCCAACTGAATCTAGAAACAGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACACAGGACTCAGCTTCCTAATCTTGAATCGAAGTTTTTCCACATTGATTCAGTGCATCCTGCTGTGTTCAAGGTTGGTTTGCGTTATTTGACAGGAGATATAGCAGGGGGTAATGCTCGTTGTATTGCGATGCTAAGAGCATTTCAAGATGCCATTAGAGACTACTGCACACCAGATGATAAAGTCCTTGTTAGGGATTTAACTTCAAAAATCAGTAGTTATGTATCATTTTTTAGTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTTAAGAGTCGTATTGTCAATTTGCCTTTAAGTCTTTCTGAGTCTGAGGCAAAAGCAGCTCTGTCTTCTGATATTGACCGGTTCATTAATGAGAAAATAATTCTTGCTGATAAGGTGATTGTTAGACATGCTTTTACAAAGGTTAAGGATGGGGATGTTCTTCTCACATATGGATTGTCATGTGTGGTTGAGATGATTCTTTTATATGCCCATGATCTTGGAAAACAGTTCCGTGTTGTTGTGGTAGACTCCCGGCCAAAGCTTGAAGGTCAGGCCTTACTTCGTAGGCTAGTGGCTAAGGGCCTGAATTGCACATACACTCATATAAACGCTGTTTCTTACATAATGCACGAGGTCACACGGGTTTTTCTTGGAGCTTCAGCAGTTTTGTCTAATGGAACTGTATATTCTCGGGTTGGGACTTCATGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCAACTAGATTCACTTTGTTCGAATGAACTAGGTGACCCAGATGCTGTTGCCAGAGTTCCAGGACGAATGGATGTCAATTATCTGGACAATTGGACTAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCTGCCATTGTTACGGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATTGTACGTGAATATCGACGTGAGCACTTATTGATGTAG 1605 0.433 MIPPPPRHLSEKTATIPVPESPSSGDRHVAIGSSNFPGDSSLLNPPQNPSHATRIEEKREEKEVLQSSSKPLKAKTTKAERRALQEAQRAAKAASKAEGSKAFAESGRAAPGKNTKQTSQKKDGPPSTSPVATDKKTGDHPLGKDRKKEAPPPRMQFDDKKRVEKAKRRSVVNPTESRNRVELFQHLPQYEHRTQLPNLESKFFHIDSVHPAVFKVGLRYLTGDIAGGNARCIAMLRAFQDAIRDYCTPDDKVLVRDLTSKISSYVSFFSECRPLSMSMGNAIRFVKSRIVNLPLSLSESEAKAALSSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILLYAHDLGKQFRVVVVDSRPKLEGQALLRRLVAKGLNCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVQLDSLCSNELGDPDAVARVPGRMDVNYLDNWTSEDNLRLLNLMYDATPSDYVSAIVTDYGMLPPTSVPVIVREYRREHLLM. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01223 534 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 29 531 - -
Seca11g01223 534 Gene3D - 321 527 IPR042529 -
Seca11g01223 534 MobiDBLite consensus disorder prediction 27 51 - -
Seca11g01223 534 MobiDBLite consensus disorder prediction 111 134 - -
Seca11g01223 534 Pfam Initiation factor 2 subunit family 225 517 IPR000649 GO:0044237
Seca11g01223 534 SUPERFAMILY NagB/RpiA/CoA transferase-like 209 527 IPR037171 -
Seca11g01223 534 MobiDBLite consensus disorder prediction 52 87 - -
Seca11g01223 534 MobiDBLite consensus disorder prediction 1 174 - -
Seca11g01223 534 MobiDBLite consensus disorder prediction 137 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01223 Seca-Chr11 13098860 13104051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01223 14 534 Eukaryotic Initiation Factors Gene Family AT5G38640 66.105 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01223 K03680 - gmx:100795256 812.372