Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01171 ATGGCAACAAGCGTGGTTGAGATGTTGGAGAAATGGTCGGCAATGCGTGAGAAAGGTGAGGTGGAAATAGAAGTTTCTGAGTGGTTTCAAACCCTAACAGAAGATGTAATTACAAGAACAGCATTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCCGGCTACAAGCCCAACAAATGGTCTTAGCTGCCGATGCCTTTCAAAAAGTATTCATTCCAGGTTACAGATTCTTTCCCACAAGGAGGAATATAAAATCTTGGAAACTGGACAAGGAAATTAAGAAATCGCTGGTGAAGCTGATTGAACGACGGAAAGAGAATTCATGTGGGAATATGGAAAATAAAGGGCCAAAGGATTTGCTGGGGCTAATGATTCAAGCCTCCAACAGCAGTTCCTCTTCCAATGTCACAGTGGATGACATCGTGGAAGAGTGTAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACTTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACACTGGCAGGTACAGGCACGTGATGAGGTCCTCAAGATGTGTGGAGCACGTGACCTCCCTACTAAAGACCATGTTGTAAAGCTCAAGACGCTGAGCATGATAGTGAATGAGTCCCTGAGGCTGTACCCACCCACAATCGCCACAATTAGAAAGGCAAAAACAGACGTGGAATTGGGTGGATACAAGATACCACGTGGGACGGAGCTGTTAATTCCAATCCTGGCCGTTCATCATGATCAAGCGATATGGGGGAATGATGCGAATGAATTCAATCCTGGCCGTTTCTGTGAAGGTGTAGCGAGAGCCGCGAAGCACCCAGTGGCATTCATTCCATTTGGTCTCGGTGTGCGCACATGCATAGGACAAAACCTTGCAGTGCTACAAACCAAACTGGCCCTAGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTGATGCTACTCTATCCTCAGTATGGTGCACCAATCATTTTCCAACATTTGTCAACAGTGGATGATCCTGATCAAGGGTCCTCCTCATAG 1065 0.4685 MATSVVEMLEKWSAMREKGEVEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNIKSWKLDKEIKKSLVKLIERRKENSCGNMENKGPKDLLGLMIQASNSSSSSNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVQARDEVLKMCGARDLPTKDHVVKLKTLSMIVNESLRLYPPTIATIRKAKTDVELGGYKIPRGTELLIPILAVHHDQAIWGNDANEFNPGRFCEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSTVDDPDQGSSS. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01171 354 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 283 292 IPR017972 GO:0005506|GO:0016705
Seca11g01171 354 Gene3D Cytochrome P450 1 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS P450 superfamily signature 281 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS P450 superfamily signature 151 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 SUPERFAMILY Cytochrome P450 4 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 335 - -
Seca11g01171 354 Pfam Cytochrome P450 6 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS E-class P450 group I signature 32 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS E-class P450 group I signature 160 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS E-class P450 group I signature 140 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS E-class P450 group I signature 280 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g01171 354 PRINTS E-class P450 group I signature 290 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01171 Seca-Chr11 12181432 12185915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01171 4 347 Cytochrome P450 AT2G26710 76.218 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01171 K15639 - gmx:100780027 624.394