Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01156 ATGGCCACCACCACACCTTGTAGAGATGAACCTGACTATGACAGCAGCTCCTCTTCCATCACCGTGCCGGAATCAAGCCGGAGCTGGATGAGCAACCTCAGCTTCGGCAGCCGCCGTCGCCGGAGCTCCGTCTCTGTTTGTTCCACCACCACAGACACCTCTCTGTTTCTCGGTTCCCACGCTAAGCCTCACAAGGCTAACCAAGCTGCATGGGAGGCCATGCGCCGGCTCCGAAGCGATAAGGGTCGGGTCGGACTCGACCACTTCCGGCTCCTCCGCCGCCTGGGAAGCGGTGACATAGGGAATGTGTACCTCTGCCAGATAAGGAACCCTGTTGTGGGGTTACCACAGTGCTTTTATGCTATGAAAGTTGTGGATAGAGAAGCACTTGCTATAAGGAAGAAGCTTCATAGAGCAGAAATGGAGAAGGAGATTTTGGGGTTGCTTGATCACCCTTTTTTGCCTACTTTATACACTGAGTTTGATGCTTCTCATTACTCTTGTTTAGTCATGGAGTTCTGTCCTGGTGGAGACTTGTATGCTGCTCGCCAACGCCAGCCAGGGAAGCGCTTTACCATATCATCCACTAAGTTTTATGCAGCTGAGACACTTTTGGCATTGGAGTATCTCCACATGATGGGAATAGTGTATAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGAGAGGATGGGCATATTATGCTTTCAGATTTTGATCTTTCTCTTAAATGTGACGTTGTTCCTAAGCTTTTAAGGAGTAAGACAAGATTGGAAAGGAGTATCAAGAGTACTAAGAGATCTGCACCTTCCTGTGCTGCTCCCATGCAGCCTGTGCTGTCCTGTTTCTTAGCATCTAGCAAGAAAAAGAAAGCAGCAACTGTGACAACAGTTATAAGGGAAAATGTTGAGGTTGATGATCCTGAAGTGGTTGCAGAGCCTATTGATGCTAGGTCCAAGTCATTTGTTGGGACACATGAGTACTTAGCACCAGAAGTGATATTGGGGCAAGGTCATGGGAGTGCTGTGGATTGGTGGACTTTTGGGGTGTTTTTGTATGAGATGTTATATGGGAGAACACCTTTCAAAGGTGAAAACAATGAGAAAACACTAGTGAACATCTTGAAGCAGCCATTGAGTTTCCCTAGAATTGCAGTGAGCAGTAGTAGTGAGTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGTTGTTGGTGAAGAATCCAAACAAGAGAATTGGAAGCTGCATGGGTTCTGCTGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCTTTAATTAGATCAATTAGGCCCCCTGAGGTTCCTGCTGATAAGAACAAGATTAGGAGTAGGGTTTTGGTACCAAAACTAAGCAAAACAGAAAGGGATCAACCATATCAGCTTTCTCATCATTTTGACTACTTCTAA 1437 0.4614 MATTTPCRDEPDYDSSSSSITVPESSRSWMSNLSFGSRRRRSSVSVCSTTTDTSLFLGSHAKPHKANQAAWEAMRRLRSDKGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLHRAEMEKEILGLLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFTISSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKSTKRSAPSCAAPMQPVLSCFLASSKKKKAATVTTVIRENVEVDDPEVVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLSFPRIAVSSSSEYEEMVKVQDLISKLLVKNPNKRIGSCMGSAEIKRHEFFKGVNWALIRSIRPPEVPADKNKIRSRVLVPKLSKTERDQPYQLSHHFDYF. 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01156 478 Gene3D Phosphorylase Kinase; domain 1 87 173 - -
Seca11g01156 478 Gene3D Transferase(Phosphotransferase) domain 1 174 243 - -
Seca11g01156 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Seca11g01156 478 CDD STKc_phototropin_like 87 446 - -
Seca11g01156 478 FunFam protein kinase PINOID 174 242 - -
Seca11g01156 478 MobiDBLite consensus disorder prediction 1 23 - -
Seca11g01156 478 Gene3D Transferase(Phosphotransferase) domain 1 315 446 - -
Seca11g01156 478 SUPERFAMILY Protein kinase-like (PK-like) 73 455 IPR011009 -
Seca11g01156 478 FunFam protein kinase PINOID 2 87 173 - -
Seca11g01156 478 SMART serkin_6 89 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01156 478 PANTHER FLIPPASE KINASE 1-RELATED 40 449 - -
Seca11g01156 478 Pfam Protein kinase domain 318 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01156 478 Pfam Protein kinase domain 90 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01156 478 ProSiteProfiles Protein kinase domain profile. 89 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01156 478 FunFam serine/threonine-protein kinase D6PK-like 316 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01156 Seca-Chr11 12057613 12059830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01156 9 478 AGC Kinase Gene Family AT2G26700 60.342 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca11g01156 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01156 K08286 - gmx:100777988 811.601