Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01127 ATGGCTGCTGTGAATCAACTAGGAATTGATATCTTATCTAGAATTGCAATATTTGGGATAACCCCATCTAGACTTTCCAGATTGTACTCAAATAGCCAAATCAGTTTTCCAAAGGCTGTTCCTAAAAAGATTCTGGAATTGATGAATGTCCCTGGGCTCACTAGAGAAAATGTTGCTAGCCACCTCCAGAGCAACTTTAATAACTCATTCATCAGCTCACAAGATTCAACATTTGGGGCTACTTCAATAAATGGAATAGATCTGCAAACTCTTCCAGTTGCTGGCCAGCTCCAAGCACAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTCGGCAGATCAGTTGCAAAAGCAGGTATTCCCATGCCTCTAGTTGAGCAAAAGAACCCTTTCAGTTTTGAGAACTCAAAATTAAGAGCAACAGCTTGCAATTGGTGGAATCAAGTGAGCATGTGTCTGTCAGGGTATGAAATTAAGCAAGGAAATCAAGGTGGCAACACCTTGGAGAAAACTGATGCAACTGGTGAAAATGTAAACGGGGAAGATGCTATTGATGTTGATGACAATGATGAAACTATTGATTGGATTTTGAAGCAGTAA 597 0.407 MAAVNQLGIDILSRIAIFGITPSRLSRLYSNSQISFPKAVPKKILELMNVPGLTRENVASHLQSNFNNSFISSQDSTFGATSINGIDLQTLPVAGQLQAQSLAKLQAAGLGRSVAKAGIPMPLVEQKNPFSFENSKLRATACNWWNQVSMCLSGYEIKQGNQGGNTLEKTDATGENVNGEDAIDVDDNDETIDWILKQ. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01127 198 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 132 IPR044841 GO:0003700|GO:0006355
Seca11g01127 198 Gene3D - 1 68 - -
Seca11g01127 198 SUPERFAMILY Homeodomain-like 33 65 IPR009057 -
Seca11g01127 198 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 67 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01127 Seca-Chr11 11765793 11767153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01127 33 138 Response Regulator Gene Family AT3G16857 55.556 2.99e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca11g01127 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01127 - K14491 gmx:100809583 138.658