Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01119 ATGGCTTCCACCCCTGTTGTGTTGTTAGTCTTACTGTTGTTGATACTATTTACAAAGGAAGCCACACTCACAGTTGGAGAAAATAACTCTAGCATAATTCATTTGGGGTCTTCCCTGTCTCCTAAAGGTGCTCATACTTCATGGGTATCAAGTTCTGGCCATTTTGCTTTTGGGTTTTACTCACAAGGTCATGGCTTTGCTGTTGGGATATGGCTGGTAAGTCCATCTGAAAGTGAAAACACAACCACTGTTGTATGGACTGCTAACCGTGATAGTCCCCCCTTAGTCTCCTCTAATGCCACATTGGTTTTGACCTTGCAAGGCCTACTTCTTCGAAATGGGAAGGAAGACCCACGTCTCATTACAGACTCAGACTCAGACTCATTTTTCGACCAAAAAAAAAACTCCAACTCATCTTCAGCATCTATGCTTGATTCTGGCAACTTTGTGCTTTATGGTGATGAGCATTCTGGTGTTATCTGGCAAAGCTTTGATCACCCAACGGACACCATATTAGGAGGTCAGAATTTAACTGCATATAATAAGCTGGTCTCTAGTAAGTCCAAATCAGACCATTCGAGTGGACGTTTCTATCTCAACATGCAATCTGATGGAAACCTTGTTGCTTACCCTATGAGCAGCTCAGGAGATGCGGAAGATGCTTACTGGGCTACGCAGACTTATACTCCGAATTACAGACAGCTCAGTCTAGACGTTGAAGGCTCTCTTTGCCAGAATGGTGATGACCGTCGATGTTTTGATCATAGTATTAAGCCCAGAAAGAAGCCACAGAACACAACTTCTTCAATCTACCGTGCAACACTTGACGTAGATGGGAATTTGAGATTGTATGAGCACCAATTTGAGGGCAATACTACTTCTTCTTCTTCAAGCTCACGCATGGAAATTTTGTGGCAAGCACTGAATGATACATGTCAAATCAACGGGTTTTGTGGCTTCAACAGTTATTGCTCCAATGCTACGTGTGAGTGTTATCCTGGTTTTGTCCCCTCTGAAAGCAGAAGTAACGTGTATCTGGATTGCCTACAGATCCACAGCAAAGACGATTGTGAAAGCAGTGAAGACCCGATGATGTTGTATAATATTACTCATTTGGAGAACATGTCTTGGGGTGATACACCATATTCGGTTATACAGATGAAGAAGGAAACTTGTGACAAATCTTGCAGGGAAGATTGTGATTGCGGGGGAGCATTATACACGAGTGGCAACTGCAAAAAATATAGGCTTCCCCTTATATATGGCAGTAGGATGGCTCAAAATGCATTAACAGTGGTGGCCCTCTTAAAGATGCCTTCAGGAAATGTCACTCTTCCAACCCCAACTTCAAACAACACCGACATGCCTAAGGTTGTTGTTGATAACAAAACAGGTCTGATAATGGTTCTAGCCCTCACATTGGGTTGCATTTCGCTCTTCTGTTTGGTCTTTGCAGTGTTCATTTTCTTCACTTACAGGCGTCAAGTTTATAGCTATACAATGTTGTCTGCAAGTGAAAATCTAGGATTTACTGAAGAATGTTCGTTGCGTTCATTTACTTTTGATGAACTTGCAAAATCAACTGGAGGGTTCACGGAAGAGGTAGGCAGAGGATCATTTGGAGCTGTTTATAGAGGTACAGTTGGTGATGGTAGCAGAAGCATTGCTGTCAAGAGACTGGAGAAAATGGCTGATGAAGGGGAGAGGGAATTCCGAGCTGAAATTACTGCCATTGCTAGAACTCATCATAGGAATTTGGTTAAGCTGATTGGTTTTTGTGTAGATGGATCGAGGAAGCTTCTTGTATATGAATATGTCAGCAATGGGTCTCTTGCAAATCTCATCTTTAATAGGGAGATGAAACTGTCTTGGAAAGAGAGAATAAAGATGGCATTGGATGTGGCTAGAGGAATCCTGTATCTACATGAAGAGTGTGAAGTCCGTATTATCCATTGCAATATAAAGCCTCGAAATATACTCATGGATGAAGCATGGACTGCTAAGATCTCTGATTTTGGATGGGCAAGGCTATTAAAGCCGGAGTATTCAAGAATGCAAAATGGGGATGATGGGACAAGCAGGTACTTGGCACCTGAATGGCACAAGGATGCATCAATATCTGTGAAAGCTGACACTTACAGTTTTGGCAAGGTATTATTGGAGATTGTATGTCGCAGAAGCAGTATAGAGATAGATGTTTCCTCAGCTGAGGAGATACTCCTTTCCAGTTGGGTATATCTGTGCTTTGCAGCAGGGCAGTTGAATAAGCTTGTTACACATGAACATGATGAAGAAGGTGTAGATTGGAAGATATTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACAACCCATCTCTTCGTCCTTCAATGAAGAATGTCATCTTGATGTTGGAAGGATTGAAAGATGTTCCAGTAACAGGAACAAGAGCTGAAACACAACCAAAGCAGATAGCACTTGGTTTTTCACTTTCACCCAGTAGTACTCCTTGGCTTTCCTCTTCTGGCCTCTTTGCATTTGGCTTTTATCAGCAAGGCAGTGGCTTTGTCGTTGGAATTTGGTTGGTTGGCAAGAAGAGTCAGACAGTGGTATGGACTGCATTCCGGGATGACCCTCCAGTCACCTCCAATGCAAAACTACAACTTACCAAGGATGGAAAGCTAATACTAATTACAGAGCAAGGACCAGAGAAGGTTCTTATTGCTAATGCTGGTGGTGCAACAGCTTCCTTTGCCTCCATGCTTGATGATGGGAACTTTGTACTATACAGCAATAATTCCAGCATCATATGGCAGAGTTTTGATTACCCAACTGATACTATCTTAGGGGATCAATCTCTACCTTGTGGAGGCCAACTATTCTCTAGTTTATCAGATATTAACCGCTCAACTGGACGATTTCGTCTCAAGATGCAGGATGATGGGAATCTTGTTTTGTATCCAGCAAACACAACTGACACAAGAAGGGATGCTTACTGGAGCTCTGATACTCAAGTTGATGCTGGTTCCAAGAATCATCTTTACCTCAACAAAACGGGTCTACTGCAGATCATGAATACCAGTAATTTGGAAGTTGATAGTCTTATTACTGATTCATCTTCCATTAACAATGGGAACCAGACCACTATATATCGTGCAACCCTGGATTTTGATGGGGTTTTTCAGCTGAATGCTCATGTTAATGGCAGTGACAATAAAATTGAAAAGTGGCCGAAGGAGGGTACATGTGAAGTAAAGGGTTTTTGTGGCTTCAATAGCTACTGCACATTCAATGACGACCAGCCAGTTTGCAATTGTCTTAAGGGTTTTGACTTCATAGATGCAAATCAAGAGACTCTTGGTTGCAAAAGGAACTCTTCAAAAGTAGAGTGTAGAAGTGAGAAAGACAGTGCAGCCTTTTATAACATGGCCTCCATGAACAATATTATATGGGAGGATCATCCTTATTTTAAGGCTGAAATGTCACAGGAAGAAGAATGCTCCTCTTCATGTTTGGCTGATTGCAACTGTTGGGCTGCACTATATCAATATAATGGTGTATCGGGAGGAACCTGCAAGAAACAAGGGCTGCCTTTGAGATATGTCAAAAGGAGAATACCATCAGGTCAAACTGGCTCGACCACGGCATTCTTAAAGGTGGGAAACAACAGCCTCAAAATCTGGAAGTCCAATGAAACACATGTTCATGCACAACCACCTCCCATCAAGAGTACAAGTAACAAAGCAATAGTGCAGATTATTGTTGTTACATCTGTGTTTACTTTGCTTTTATGTTCAACCATTGCAATCTCCAGCCATTACATGTACAAGATGCAGTATTGA 3828 0.4211 MASTPVVLLVLLLLILFTKEATLTVGENNSSIIHLGSSLSPKGAHTSWVSSSGHFAFGFYSQGHGFAVGIWLVSPSESENTTTVVWTANRDSPPLVSSNATLVLTLQGLLLRNGKEDPRLITDSDSDSFFDQKKNSNSSSASMLDSGNFVLYGDEHSGVIWQSFDHPTDTILGGQNLTAYNKLVSSKSKSDHSSGRFYLNMQSDGNLVAYPMSSSGDAEDAYWATQTYTPNYRQLSLDVEGSLCQNGDDRRCFDHSIKPRKKPQNTTSSIYRATLDVDGNLRLYEHQFEGNTTSSSSSSRMEILWQALNDTCQINGFCGFNSYCSNATCECYPGFVPSESRSNVYLDCLQIHSKDDCESSEDPMMLYNITHLENMSWGDTPYSVIQMKKETCDKSCREDCDCGGALYTSGNCKKYRLPLIYGSRMAQNALTVVALLKMPSGNVTLPTPTSNNTDMPKVVVDNKTGLIMVLALTLGCISLFCLVFAVFIFFTYRRQVYSYTMLSASENLGFTEECSLRSFTFDELAKSTGGFTEEVGRGSFGAVYRGTVGDGSRSIAVKRLEKMADEGEREFRAEITAIARTHHRNLVKLIGFCVDGSRKLLVYEYVSNGSLANLIFNREMKLSWKERIKMALDVARGILYLHEECEVRIIHCNIKPRNILMDEAWTAKISDFGWARLLKPEYSRMQNGDDGTSRYLAPEWHKDASISVKADTYSFGKVLLEIVCRRSSIEIDVSSAEEILLSSWVYLCFAAGQLNKLVTHEHDEEGVDWKILERMVKVGLWCVQDNPSLRPSMKNVILMLEGLKDVPVTGTRAETQPKQIALGFSLSPSSTPWLSSSGLFAFGFYQQGSGFVVGIWLVGKKSQTVVWTAFRDDPPVTSNAKLQLTKDGKLILITEQGPEKVLIANAGGATASFASMLDDGNFVLYSNNSSIIWQSFDYPTDTILGDQSLPCGGQLFSSLSDINRSTGRFRLKMQDDGNLVLYPANTTDTRRDAYWSSDTQVDAGSKNHLYLNKTGLLQIMNTSNLEVDSLITDSSSINNGNQTTIYRATLDFDGVFQLNAHVNGSDNKIEKWPKEGTCEVKGFCGFNSYCTFNDDQPVCNCLKGFDFIDANQETLGCKRNSSKVECRSEKDSAAFYNMASMNNIIWEDHPYFKAEMSQEEECSSSCLADCNCWAALYQYNGVSGGTCKKQGLPLRYVKRRIPSGQTGSTTAFLKVGNNSLKIWKSNETHVHAQPPPIKSTSNKAIVQIIVVTSVFTLLLCSTIAISSHYMYKMQY. 1276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01119 1275 FunFam S-receptor-like serine/threonine-protein kinase 500 605 - -
Seca11g01119 1275 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Seca11g01119 1275 Pfam S-locus glycoprotein domain 1036 1106 IPR000858 GO:0048544
Seca11g01119 1275 FunFam Serine/threonine-protein kinase 939 1070 - -
Seca11g01119 1275 Gene3D - 27 165 IPR036426 -
Seca11g01119 1275 Gene3D - 815 937 IPR036426 -
Seca11g01119 1275 FunFam Serine/threonine-protein kinase 167 297 - -
Seca11g01119 1275 Gene3D Phosphorylase Kinase; domain 1 495 605 - -
Seca11g01119 1275 ProSiteProfiles Bulb-type lectin domain profile. 30 164 IPR001480 -
Seca11g01119 1275 Gene3D - 938 1037 IPR036426 -
Seca11g01119 1275 Gene3D Transferase(Phosphotransferase) domain 1 606 814 - -
Seca11g01119 1275 CDD B_lectin 825 939 IPR001480 -
Seca11g01119 1275 SUPERFAMILY alpha-D-mannose-specific plant lectins 192 286 IPR036426 -
Seca11g01119 1275 FunFam Putative receptor-like protein kinase 606 808 - -
Seca11g01119 1275 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 228 IPR036426 -
Seca11g01119 1275 FunFam Serine/threonine-protein kinase 168 315 - -
Seca11g01119 1275 Pfam D-mannose binding lectin 864 948 IPR001480 -
Seca11g01119 1275 Pfam D-mannose binding lectin 83 179 IPR001480 -
Seca11g01119 1275 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 40 808 - -
Seca11g01119 1275 SUPERFAMILY alpha-D-mannose-specific plant lectins 864 999 IPR036426 -
Seca11g01119 1275 MobiDBLite consensus disorder prediction 122 141 - -
Seca11g01119 1275 ProSiteProfiles Protein kinase domain profile. 529 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01119 1275 Gene3D - 168 315 - -
Seca11g01119 1275 SUPERFAMILY Protein kinase-like (PK-like) 512 801 IPR011009 -
Seca11g01119 1275 Pfam Protein kinase domain 533 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01119 1275 FunFam Serine/threonine-protein kinase 940 1081 - -
Seca11g01119 1275 SMART blect_4 39 167 IPR001480 -
Seca11g01119 1275 SMART blect_4 824 939 IPR001480 -
Seca11g01119 1275 ProSiteProfiles Bulb-type lectin domain profile. 819 937 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01119 Seca-Chr11 11698454 11702968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01119 448 802 Receptor kinase-like Gene Family AT4G18250 35.912 4.95e-60 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca11g01119 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01119 - - cam:101496142 1061.98