Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01094 ATGGCAAATAAAAGCTTGGACTTCTACCTCTTTGATCCTATTAGACGACATATGTTAGACTGGAATAAGCGTGTTAGCATCATTGAAGGAGTTACACAAGGTCTTCTTTATCTTCGAGAATATTCGAGATTCACCATAATTCATAGAGACATAAAAGCTAGCAATATTTTATTAGACACTAAGATGAAGCCAAAGATATCAGACTTTGGGATGGCAAGAACATTCACAAAAGATGAACTAGAAGCAAACACTAGCAAGATTGTGGGAACATATGGTTATGTTCCTCCTGAATATGTTAAGATAGGTGTGTACTCCACTAAATCTGATGTTTATAGTTTTGGAGTCCTTCTTCTACAAATTATAAGTGGCAAGAAGACAGCTGGCTATTATGGAGAGAATGAAGATTTAAAGCTCTTGGAGTTTGCTTATGAGTTATGGAAAGGAGGAAAAGGTATGGAGTTTGTGGACCATTCACTTGATGATACATCTTCCCTGTGCAAATTAATGAGATGCATGCAAATTGCTCTGTTATGCGTCCAAGAACATCCAAATGATAAGCCTTCCATGCTGGAAGTTTCTTCAATGTTGAGAAACGAAAATAACTCTCTAGCCACCCCTAAAAGGCCTGCATTTTCAAAAGTGAAAGATGAGGAAGAAATAAATGAATGTCAACCCCTTAAAATTATATCGGTCAATGATTGA 702 0.3661 MANKSLDFYLFDPIRRHMLDWNKRVSIIEGVTQGLLYLREYSRFTIIHRDIKASNILLDTKMKPKISDFGMARTFTKDELEANTSKIVGTYGYVPPEYVKIGVYSTKSDVYSFGVLLLQIISGKKTAGYYGENEDLKLLEFAYELWKGGKGMEFVDHSLDDTSSLCKLMRCMQIALLCVQEHPNDKPSMLEVSSMLRNENNSLATPKRPAFSKVKDEEEINECQPLKIISVND. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01094 233 Gene3D Transferase(Phosphotransferase) domain 1 1 221 - -
Seca11g01094 233 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01094 233 SUPERFAMILY Protein kinase-like (PK-like) 1 216 IPR011009 -
Seca11g01094 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Seca11g01094 233 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 215 - -
Seca11g01094 233 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g01094 233 Pfam Protein tyrosine and serine/threonine kinase 15 195 IPR001245 GO:0004672|GO:0006468
Seca11g01094 233 FunFam Uncharacterized protein 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01094 Seca-Chr11 11412712 11414165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01094 1 211 Receptor kinase-like Gene Family AT4G11480 50.472 1.43e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca11g01094 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01094 - - vun:114175226 377.867