Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01080 ATGGCAGAAGAAGAGCATAATACATTTGAAAATTATAGTGGTGATGGACTTGAAAACAAAAAGATTGATGAGATACATGATGCTATTCCTAATGATCTTATACCAAGAGTTGGGATGGAATTTGACACTGAAGATGCAGCCTATAATTTTTACAATTCTTATGCTTACAGAGTGGGTTTCAGTGTAAAGACCAATAAAGGACACAAAGGTCATGATGGAAAGATGATTGATAGAGTGTTTTGTTGTTCATGTGAAGGTTATCGCGAGAAAGATAAACGAGAGGCTAATACCAAGAATCCTCGTGCACAGATAAGATTTGGTTGCTTAGCTAAGATGAAAGTTAATAGTCGTTTAACCGGGAAGTATCGTGTTACCGTATTTGTTGCTGAACATACACATGAGACTACAACTCCGAGCAAGAGTCATTTGCTTAGATCTCAAAGGAAAATAACTACTTCTCAAGCAGCCGAGGTTGATTTGGCTGAGAGTTCTGGAATTACTCCAAAGGCAAGTTGTGAGTTAATGGCTAGGCGAGTTGGCGGGCGTGAGAATCTAGGATTCATTCCAGAAGACTACAAAAATTATTTACGCTCTAAGAGAACAATTCAAATGAGGTCAGGGGATACATGTGGTGTGTTAGAGTATTTACAAAAAATGCAATCACAAGATCCTAACTTTTTCTATGCAATACAAGTTGATGAGGATGATTTAATCACTAACATCTTTTGGGCAGATGCAAATATGATGGTTGATTATTCATATTTTGGTGATGTAGTTTGTTTTGACACTACTTATAGAAAAAATAAAGAAGGTCGTCCATTTGCAATGTTGGTTGGAGTGAATCATCACAAGCTTAACATTGTATTTGGTGCTGCATTGTTATATGATGAGACTGCAGAAAGCTTTGTGTGGTTGTTTAATACTTTTGCTAAAGCTATGTCAGGAAAGAAACCCCAAACTATTCTTACTGACCAAGATGCAGCAATGGCAAAAGCGTTAGCTTTGGTATGGCCAGAAACATGTCATCGCCTTTGTATTTGGCATTTATATCAGAATGCTTTAAAGAAACTTAGTATTTCTCAAAGATGA 1089 0.3673 MAEEEHNTFENYSGDGLENKKIDEIHDAIPNDLIPRVGMEFDTEDAAYNFYNSYAYRVGFSVKTNKGHKGHDGKMIDRVFCCSCEGYREKDKREANTKNPRAQIRFGCLAKMKVNSRLTGKYRVTVFVAEHTHETTTPSKSHLLRSQRKITTSQAAEVDLAESSGITPKASCELMARRVGGRENLGFIPEDYKNYLRSKRTIQMRSGDTCGVLEYLQKMQSQDPNFFYAIQVDEDDLITNIFWADANMMVDYSYFGDVVCFDTTYRKNKEGRPFAMLVGVNHHKLNIVFGAALLYDETAESFVWLFNTFAKAMSGKKPQTILTDQDAAMAKALALVWPETCHRLCIWHLYQNALKKLSISQR. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01080 362 Pfam MULE transposase domain 258 352 IPR018289 -
Seca11g01080 362 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
Seca11g01080 362 PANTHER OS01G0519700 PROTEIN 34 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01080 Seca-Chr11 11189727 11191410 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g01080 MULE 1.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01080 K17604 - ccaj:109817905 619.387