Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01047 ATGGCGCCAGCGATTCTCCCAGATCTCGGAGCTGAGATTCTGATTCCCGTTTGCGCCGTCATTGGAATAGGGTTCGCTCTCTTCCAGTGGGTCCTCGTCTCTAACGTGAAGCTATCTGCTGCCAGAGACGCTTCTTCTGACGGCAAGAATGGCTACAACGATTACCTCATCGAAGAAGAGGAGGGCATCAACGACCACAACGTTGTTCTCAAATGCGCTGAAATCCAGAACGCCATTTCCGAAGGAGCAACCTCATTCCTTTTCACTGAATACAAGTATGTGGGAATCTTCATGGCCGCCTTTGCCATTTTGATATTCCTTTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCTACCAGCCTTGCACCTATGATAAAACTAAGATGTGTAAACCAGCTCTTGCCACTGCCATTTTCAGCACCATATCCTTCCTGCTTGGTGGCATCACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCTAATGCAAGAACCACCCTGGAGGCCAGAAAGGGTGTTGGGAAGGCTTTCATTACAGCGTTTAGATCAGGTGCAGTTATGGGATTTCTTCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGAAACATTCCCGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGATAATGTCGGTGATAATGTTGGGGATATAGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGACGAATCATGAGCTGACTGCCATGCTATACCCTCTCATCATCAGTTCTGTGGGCATCCTTGTCTGTTTGCTTACCACCTTATTTGCAACTGACTTTTTTGAGATCAAGGTTGTGAAGGAAATTGAGCCAGCATTGAAAAAACAGCTCATTATTTCAACAGCATTGATGACTGTTGGGATTGCCATTGTTAGTTGGATTGCACTCCCATCTTCCTTCACTATCTTCAATTTTGGAGAGCAGAAAGTCGTCAAGAGCTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTCTGGGCAGGTCTTATCATCGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGCCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGCGCTGCTACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATCTTTGCTATTGCAGTCAGTATTTTCGTTAGTTTCAGCTTTGCTGCCATGTATGGCATTGCTGTTGCTGCACTTGGGATGTTGAGTACCATAGCTACTGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGTGGTATTGCTGAGATGGCTGGGATGAGTCACAGAATTCGAGAGAGAACTGATGCCCTTGATGCCGCAGGAAACACAACTGCAGCTATTGGGAAGGGATTTGCCATCGGTTCGGCCGCCCTTGTGTCTCTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTTCAACAGTTGATGTGTTGACTCCAAAGGTTTTTATTGGTTTGATCGTGGGTGCTATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATTCCAGGCTTGATGGAGGGAACTGCTAAGCCTGACTATGCTACATGTGTTAAGATCTCCACTGACGCTTCTATTAAAGAAATGATTCCACCCGGTGCTCTTGTCATGCTGACACCCCTTGTTGTAGGGATCTTTTTTGGTGTAGAAACCCTTTCTGGTGTCCTCGCTGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGAACCCTTGGTCCAAAGGGGTCAGACCCTCACAAAGCAGCTGTTATTGGTGACACCATTGGGGACCCTCTGAAGGATACATCTGGACCTTCACTCAACATCCTTATCAAGCTGATGGCTGTTGAGTCACTTGTGTTTGCTCCCTTCTTTGCTACACATGGTGGCTTACTCTTCAAAATCTAA 2292 0.4625 MAPAILPDLGAEILIPVCAVIGIGFALFQWVLVSNVKLSAARDASSDGKNGYNDYLIEEEEGINDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMAAFAILIFLFLGSVEGFSTSYQPCTYDKTKMCKPALATAIFSTISFLLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGTNHELTAMLYPLIISSVGILVCLLTTLFATDFFEIKVVKEIEPALKKQLIISTALMTVGIAIVSWIALPSSFTIFNFGEQKVVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01047 763 Pfam Inorganic H+ pyrophosphatase 46 749 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca11g01047 763 PIRSF H+-PPtase 13 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca11g01047 763 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca11g01047 763 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca11g01047 763 NCBIfam V-type H(+)-translocating pyrophosphatase 11 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01047 Seca-Chr11 10688959 10693533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01047 1 627 Primary Pumps ATPases AT1G15690 87.816 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01047 K23025 - gmx:100775864 1430.62