Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01027 ATGTTGAAAGTGAAGGAAGGGACGAGACCACCATGGGTGGGACTTGGAGCTGCTGCGTGGGTTCAAATTGCTGTTGGAAATGCTTACACTTTCCCTCTATACTCTCCCGCCTTCAAATCCGTTCTAGGTTTCAACCAGCGTCAGCTTACTCTTCTTGGTGTCGCTAATGATATTGGTGAGAACGTTGGCCTTCTTCCTGGTATTGCCTCCAACAAGCTCCCTCCTTGGCTTATTCTCTTCATTGGTGCTCTTCTCTGTTTCCTTGGTTTTGGTGTTCTCTGGCTCGCTATCTCTCAAACTATTCCTCCACCTCCTTACTTCGTGCTATGGATTGCACTTGTTATTGCTGCCAACAGTTGTGCATGGTTAACCACTTCTATTCTTGTAACCAACATGAGAAATTTCCCTGCAAGTAGAGGCACAGTTGCAGGGATCCTGAAAGGTTATGGAGGGATCAGTGCTGCAGTTTTTACTGAAGTTTTTAGGGCAGTTCTTAATAATTCTCCTTCCAATTTCCTGTTGTTCCTTACCCTTGGTATTCCTGCTTTATGCTTCAGTGTCATGTTTTTTGTTCGTCCTTGTACTCCTGCTTCAGGTGATAATCCTGCTGAAAAGGGGTATTTTCTTTTTATCCAAGTTTCAAGTGTGGTCTTAGGTGTTTATTTGCTTGTAACAACGACACTTGATTACATTCTCCCCATAAATCAGATAGTATCATACATTTTGGTGGTTGTGATGGTTCTCCTTCTCATGGCTCCACTTGCTATCCCTTTAAAGATGACACTTTATCCCAGAAAAGCCACTGAAGCAGAAACACCTGAGCAAAAAGTTGGATCTTCAGACTGGCAAATTCAAGAAGGCAAAGAAGACAACACAACACCCCTATTAACATCTTCATCAACCAGTGCCCTTGATCCAGATGGTTCATCTGAGGTGAGTAGGCTTCTTGCTGAGGGTGAGGGAGCTGTAGTACCAACAAAGAAGAGAAGGCCCAGACGAGGGGAAGATTTTAAATTTACTGAGGCTCTAGTAAAGGCTGATTTCTGGCTATTATTTTTTGTATACTTTGTTGGTGTTGGAACTGGGGTTACTGTTGTTAATAATCTGGCTCAAGTAGGAAATGCACAAGGTGTGGAAGATACATCTATCTTACTGTCAGTTTTCAGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAATGGTTTCAGAACACTTTGTCAGGTATGTGAAGATTTACTCTCACGCTCATATCAGTTCAAATCTCAAAGAAGTCATTGTAATAATTTCGAATTACTAA 1299 0.4234 MLKVKEGTRPPWVGLGAAAWVQIAVGNAYTFPLYSPAFKSVLGFNQRQLTLLGVANDIGENVGLLPGIASNKLPPWLILFIGALLCFLGFGVLWLAISQTIPPPPYFVLWIALVIAANSCAWLTTSILVTNMRNFPASRGTVAGILKGYGGISAAVFTEVFRAVLNNSPSNFLLFLTLGIPALCFSVMFFVRPCTPASGDNPAEKGYFLFIQVSSVVLGVYLLVTTTLDYILPINQIVSYILVVVMVLLLMAPLAIPLKMTLYPRKATEAETPEQKVGSSDWQIQEGKEDNTTPLLTSSSTSALDPDGSSEVSRLLAEGEGAVVPTKKRRPRRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVVNNLAQVGNAQGVEDTSILLSVFSFFNFVGRLGGGMVSEHFVRYVKIYSHAHISSNLKEVIVIISNY. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01027 432 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 411 - -
Seca11g01027 432 SUPERFAMILY MFS general substrate transporter 234 407 IPR036259 -
Seca11g01027 432 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Seca11g01027 432 Pfam Nodulin-like 11 258 IPR010658 -
Seca11g01027 432 MobiDBLite consensus disorder prediction 289 309 - -
Seca11g01027 432 Gene3D MFS general substrate transporter like domains 12 200 IPR036259 -
Seca11g01027 432 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01027 Seca-Chr11 10548616 10552196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01027 2 408 Nodulin-like Gene Family AT1G80530 58.454 1.24e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01027 - - gmx:100787328 552.362