Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01022 ATGGATTTAAGTACGCAGCAGGGTCAGGCTATGGAAGTGGACTGCTTTGCGTGCCCAATATGTTATGAACCATTGATAAGAAAAGGTCCTTCTGGCCTTAACTTATCAGCAATATATAGGTCTGGTTTCAAGTGTAAAAGATGCAAAAAGTCATACTCTAGTAAAGACATGTATCTGGATCTGACTGTTACTGCGGGGTTGGGGAATTACACTGAAATCCAACCAGTTCGCACTGAGCTTTTCAGGAGTCCACTTGTTTCATTTTTATATGAAAGAGGTTGGCGTCAGAATTTTAATCGAAGTGGCTTTCCTGGTCCCGATGAAGAGTTGAACATGGCTCAAGAGTACTTTAAATCTGCTAAAGGTGGTCTTCTTGTTGATGTTAGCTGTGGTAGTGGTTTATTTTCCCGAAAATTTGCCAAATCTGGAACCTATTCTGGAGTCATTGCACTAGATTTTTCTGAAAATATGCTTCGACAATGTTATGATTTCATTAAGAAAGATGACACACTCTCAGCCACTAATCTTGCTCTTGCAAGGGCGGATGTTTCTAGGCTTCCTTTCTCATCAGGTTCGGTTGATGCTGTTCATGCCGGTGCAGCATTGCATTGTTGGCCATCTCCCACCAATGCTGTTGCTGAAATCACCCGAGTACTAAGAAGTGGTGGAATCTTCGTTGGAACTACCTTTCTGCGTTACACTTCATCAACTCCTTGGATTGTACGCCCTTTCAGAGAGAGGGTTGCACAGACCTATAGCAATTTGACACAGGAAGAGATTGAAGATCTTTGCAGGTCATGTGGACTTACCAATTACTCAAGCAAGATTCAGCAGTCCTTTATAATGTTTTCTGCTCAGAAGCCTTAA 867 0.421 MDLSTQQGQAMEVDCFACPICYEPLIRKGPSGLNLSAIYRSGFKCKRCKKSYSSKDMYLDLTVTAGLGNYTEIQPVRTELFRSPLVSFLYERGWRQNFNRSGFPGPDEELNMAQEYFKSAKGGLLVDVSCGSGLFSRKFAKSGTYSGVIALDFSENMLRQCYDFIKKDDTLSATNLALARADVSRLPFSSGSVDAVHAGAALHCWPSPTNAVAEITRVLRSGGIFVGTTFLRYTSSTPWIVRPFRERVAQTYSNLTQEEIEDLCRSCGLTNYSSKIQQSFIMFSAQKP. 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01022 288 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 286 IPR029063 -
Seca11g01022 288 Gene3D Vaccinia Virus protein VP39 81 287 IPR029063 -
Seca11g01022 288 CDD AdoMet_MTases 125 231 - -
Seca11g01022 288 FunFam Putative methyltransferase, chloroplastic 81 287 - -
Seca11g01022 288 PANTHER METHYLTRANSFERASE 42 272 - -
Seca11g01022 288 Pfam Methyltransferase domain 126 226 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01022 Seca-Chr11 10460231 10463911 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca11g01022 Methyltransf_11 5.6e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01022 - - gmx:100812067 503.827