Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01015 ATGTGCAATCTTCTGGGTCAAGAGCTCTACAGTTTTTTACATCTAATCAATCTGGATCACAAATGGGCTGCTTGTGCAGTTGCTCTGCTGTTTGAGCAGAGGTGGAGGGTTAATCCCTTATGCCCTGGGCTCGAGACACAGAATAGTATAGGCTTCCCCCCTCTTATCAGCATTTGCGTTTATTTGTGGGTTATTCTCTTTACAAATGGGGTTCCAAAGCCTGGTTTGTCTAAGCCCCTGAATAGTATAGGCTTCCCCCCTCTTATCAGCATTTGCGTTTATTTGTGGGTTATTCTCTTTACAAATGGGGTTCCAAAGCCAGGTTTGTCTAAGCCCCTGGTATGGATGGGCTGCTTTTTCCAACCTGACATGGTTGATGCAGGAATTCGAGTCCTATATGGGCAGGGTGTGCATCACAACTCCCATTTATGGATATTGTGTGGTCTGTGGAAAATGGGAAGTAATGCTACTGAAAAGATCCCTTGCAATAACAGCACTGAAAGTTCAGAAACCACTATTGAGATAAAGATTAAAACATTGGATTCACAAACTTACACCCTCAGAGTGGATAAACAGATGCCAGTTCCTGCTCTGAAAGAACAGATTGCTTCTTTAACTGGAGTGTTATCAGAACGGCAGCGCTTAATTTGCCAAGGAAAAGTTCTAAAGGATGACCAGCTTCTGTCTGCCTACCGTATCCTCTATCTTTCTACGTTGTGTCCAAGAACTCTACAAAGGAAGTCAATGTCATTTTCTTGGCAACTGTTACCACAGTACAAAACAATCTGA 789 0.4309 MCNLLGQELYSFLHLINLDHKWAACAVALLFEQRWRVNPLCPGLETQNSIGFPPLISICVYLWVILFTNGVPKPGLSKPLNSIGFPPLISICVYLWVILFTNGVPKPGLSKPLVWMGCFFQPDMVDAGIRVLYGQGVHHNSHLWILCGLWKMGSNATEKIPCNNSTESSETTIEIKIKTLDSQTYTLRVDKQMPVPALKEQIASLTGVLSERQRLICQGKVLKDDQLLSAYRILYLSTLCPRTLQRKSMSFSWQLLPQYKTI. 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01015 262 SMART ubq_7 173 247 IPR000626 GO:0005515
Seca11g01015 262 SUPERFAMILY Ubiquitin-like 167 239 IPR029071 -
Seca11g01015 262 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 162 233 - -
Seca11g01015 262 ProSiteProfiles Ubiquitin domain profile. 173 233 IPR000626 GO:0005515
Seca11g01015 262 FunFam Large proline-rich protein BAG6 165 249 - -
Seca11g01015 262 Pfam Ubiquitin family 175 239 IPR000626 GO:0005515
Seca11g01015 262 Gene3D - 165 253 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01015 173 239 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 37.313 6.86e-06 43.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01015 K23390 - tcc:18588893 135.576