Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00993 ATGTCAAGCAAAGCAAGAAGTGCCCAAAGAGAGGGTAGTCAATTAGCAATGGAAGCTACTATTAACCATAGGACTATAGCTGCATTCTCATCTGAGAAAAGGATGCTAAATTTGTTCACAACTGCTATGGAGGGCCCCAAGAAGGAAAGCATCAAGCAATCATGGATTTCAGGTTCCATATTGTCAGTGTCACAATTTATAACAACATCTATAACTTTGACTTTTTGGTATGGTGGCAGGTTATTGAATCAAGGGTTAGTGGAATCAAAACACCTTTCGCAAGTTTTCCTCATTTTGATGGGAACTGGTAAGCAAATTGCAGATACAGGAAGCATGACATCAGACATAGCTAAAAGTGGAAGAGTTATGACTTCAGTATTTGCAATACTCGATAGGAAAAGTAAAACACCTTTTGCAATACAGGTTTTCCTATCTACCCCCTTTTCCATGGCTCTCTTTCTCTTTACTATTTTAATGTTGATGGTCTCTTCAAGAAATGCCTACTGGCCACCTTCACCTAGCTACTGGGCAAGTTCCAAATTCAGTTACATATATATCATTGAAAAATTTAACCAACCTTCCACTGCTTTTTTTCTGGTCAGAGAAGAAAGCAAGACCACAAGAGCAATGTCCAAGGTTGATTACTCTATCCCTGTCTCCAGTGTTTCAACCCAAATTCCATTTTTCCCCTCCCAGCTGCAACTTCCCAGCAACAGCAACAGTCCACTTCAAATCCCAATCCACAAATTCTCCCCCAACACTTCAAACAATAATCCAACAAAGAGGAACTAG 792 0.399 MSSKARSAQREGSQLAMEATINHRTIAAFSSEKRMLNLFTTAMEGPKKESIKQSWISGSILSVSQFITTSITLTFWYGGRLLNQGLVESKHLSQVFLILMGTGKQIADTGSMTSDIAKSGRVMTSVFAILDRKSKTPFAIQVFLSTPFSMALFLFTILMLMVSSRNAYWPPSPSYWASSKFSYIYIIEKFNQPSTAFFLVREESKTTRAMSKVDYSIPVSSVSTQIPFFPSQLQLPSNSNSPLQIPIHKFSPNTSNNNPTKRN. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00993 263 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 136 IPR039421 -
Seca11g00993 263 Gene3D ABC transporter type 1, transmembrane domain 1 137 IPR036640 GO:0005524|GO:0016020
Seca11g00993 263 SUPERFAMILY ABC transporter transmembrane region 3 132 IPR036640 GO:0005524|GO:0016020
Seca11g00993 263 Pfam ABC transporter transmembrane region 7 98 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca11g00993 263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 118 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00993 Seca-Chr11 10181566 10182612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00993 2 200 Calmodulin-binding Proteins AT2G36910 30.415 2.08e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00993 K05658 - gmx:100804664 216.853