Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00939 ATGGCTTCTTCTACAATGTTGTTGTTCATGTTCTCAATGTGGCTGCTACTTTCCTACACTGAAGCCACAGAATATGTGGTCGGAGACAGTGAAAATTCGTGGAAGTTTCCTCTCCCATCACCAGATTCACTCAGCCAGTGGGCCCAGACTCACCAATTCAGAATTGGCGATACAATCATTTTTAAATATGATAACAAAACAGAATCGGTGCACCTAGTGAATGAGGAAGAGGACTATTCAAGGTGCAAAACAAAGGGACAACACGTGGTGTTCAAAGATGGAAATACCAAGGTGGTATTTACCAAATCAGGACCAAAATTCTTTATCAGTGGAAAAGAGAGTCATTGCAAGATGGGGTTAAAGATGGCTGTGCTTGTTATGTCCAAGTCTATCAAACGCAGAGAAAGTTCTCCTTCCCCGGTTCTCTCACCTTCACCACCAATTCCACCTAGTAATCATGGTGTTGATCGCAGCAGTAGATCCATGATGTGGTTGGGGTTGTTATGTCTAATAAGTATTTTTTTTGGTCTTTCACGCAAAGAGAGGAATTTTAATTTGAAAGAAAAGGAAATGGTTAAAGGAGGAAGAGTAAAGATGGGTGGAGCTGAGCCTGAGACAATGAAAGATGTTCCTCGGGTACATTCCACAGAAGTACTCCACCAACGCAGTAAAATGCCTCACAGTCCCATGAGAATGGCCATGGTGGGTTTTGCAGCAATTTCTGTGCTTGGTTATTTTGTCTTGTACTCCAATAAAAAGCCTGAAGCATCAGCTTTGGATGTTGCAAAGGTTTCTACTGGATTATCCCATCCAGATAACACCCGTCCCCGCAATTAA 837 0.4241 MASSTMLLFMFSMWLLLSYTEATEYVVGDSENSWKFPLPSPDSLSQWAQTHQFRIGDTIIFKYDNKTESVHLVNEEEDYSRCKTKGQHVVFKDGNTKVVFTKSGPKFFISGKESHCKMGLKMAVLVMSKSIKRRESSPSPVLSPSPPIPPSNHGVDRSSRSMMWLGLLCLISIFFGLSRKERNFNLKEKEMVKGGRVKMGGAEPETMKDVPRVHSTEVLHQRSKMPHSPMRMAMVGFAAISVLGYFVLYSNKKPEASALDVAKVSTGLSHPDNTRPRN. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00939 278 ProSiteProfiles Phytocyanin domain profile. 23 128 IPR003245 GO:0009055
Seca11g00939 278 FunFam Cupredoxin superfamily protein 22 132 - -
Seca11g00939 278 Gene3D - 21 132 IPR008972 -
Seca11g00939 278 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Seca11g00939 278 PANTHER BLUE COPPER PROTEIN 23 150 IPR039391 GO:0009055
Seca11g00939 278 MobiDBLite consensus disorder prediction 135 155 - -
Seca11g00939 278 SUPERFAMILY Cupredoxins 21 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00939 Seca-Chr11 9624570 9626894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00939 1 175 Phytocyanin Superfamily AT4G31840 33.333 2.90e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00939 - - gmx:100784860 177.948