Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00929 ATGCATCAAGGTGATCAAACGGTTCTGAGCTTGAGGCCTGGTGGTGGTCGAGGAAGCAGACTCCTCGCTCCTAGATTCGATTCCTCTTCATCTGCGTCTTCTGCTTCCCCTGCTTTCGGTGATCTTCCTCTCTTGCGTTCCCATGGCGCCGCTCCTTCTGCTTTCTCTATCAAGGCTGGAGATTCGCGTTTTGAAGGTCGTGAGCGTGTGCGCTATACCAGAGATCAGCTTTTACAGCTTAGAGAGGCTGTTGAGGCCCTTGATGATATTTTAAAGATCAAACAAGATATTGAAGCTGAACTTCTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACAATCCCCCACCTCAATTTCAAAATCGATATTCTGAGCCAGATAACCGGGACTGGCGTGGTCGATCTGGGCAACTTCCTGCTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGAGAATTTGGCAATACTGGCCAGGGCAATCGTCAAGACCAACTGAATTCTCAGTTTGCAAGAGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCGACGCTAGTCAAGGCTGAGGTACCTTGGTCAGCTAAAAGGGGAAGTCTCTCTGAAAAGGATCGTGTCTTGAAGACTGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATATCCTGAAGGGTCAGTTGATCGATGCTGGCATTACATCCGCTGACATACTGAAGGGAGTTATTTCACTGATATTTGATAAGGCAGTGTTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTTTGATCTTAGTGAAAAGCTGCCCCCTTTCCCATCTGAAGAGCCTGATGGGAAAGAAATAACTTTTAAGCGAGTACTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGAGAAGAAATAAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGACGTGACAAGGACAGACTTGTCAAGCTTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTCCAGGAGCTTTTAGGACCTCCTGACAGCAAGGTATGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACTATTGGTAAGCAGCTCGATGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTTAGCCGGTTGAAAGAATTGAGCACAAATCCCCAACTTGCACCACGGCTGAGGTTCATGGTTCGTGATGTTTTAGATTTGCGTACTAATAACTGGGTTCCAAGACGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATCAGAAATACCCGTGGTGTAGTTTCTGGTGCTCAAGGAAATACGGGCCCTGGGGGCTTCCCCATTGCCCGACCTGGTACAGGAGGTTTAATGCCTGGGATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGATACCTAGGACTAGATCGATGCCAAGAGGAGACATGTCAGGCACACAAACCGGAGGACGTGGTCAGCCTCCTTTCCTTTCCAAGTCATCAGCGCTGAACTCGAAGTTACTACCTCAAGGTAGTGGTGGTCTTATAAGTGGGAAAAGTAGTGCCCTAGTGCATGGAGGTGGTGCTCCTCCTGCTCGTCCATCAAACTATGGTTTAGGTACTGAGCCTGCACCTCAAAACCCTTCACCTGTTAAACCTGTTCCTGCTGTATCCTCTGAGAAGCCACAGGCTCCAGCTACAAAATTGAATACTGCTGATCTTCAGCGCAAAACTGTTTCTCTCTTGGAAGAATATTTCAATGTTCGGCTGTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCAGCTTATTACCCTGAGGTTGTCAAGGAAGCCATTTCCCTTGCGCTAGATAAAAGTCCACCATGTGTTGAACCTGTTGCCAATCTTCTTGAGTATCTGTTTATTAAAAAGATCCTTTCAGCTAGAGACATAGGGACTGGATGTTTGTTGTTTGGTTCTCTGCTGGATGATATTGGCATAGATTTGCCTAAATCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAATTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGAGAGAGATCCTTAAGAAGGTTGAGGATGACCGGTTCCAGAAAGCAGTATTTGACTCAGCAGTGCAGGTAATTACATCTGCATCCGGCCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCGGAGTGTGCTCAAGTGA 2367 0.4597 MHQGDQTVLSLRPGGGRGSRLLAPRFDSSSSASSASPAFGDLPLLRSHGAAPSAFSIKAGDSRFEGRERVRYTRDQLLQLREAVEALDDILKIKQDIEAELLGEDQSWGRSENNPPPQFQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFGNTGQGNRQDQLNSQFARAQISSNQGGGPTPTLVKAEVPWSAKRGSLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYAQLCFDLSEKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGADKLREEIRQMTAPEQEMERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMVRDVLDLRTNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRGVVSGAQGNTGPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEIPRTRSMPRGDMSGTQTGGRGQPPFLSKSSALNSKLLPQGSGGLISGKSSALVHGGGAPPARPSNYGLGTEPAPQNPSPVKPVPAVSSEKPQAPATKLNTADLQRKTVSLLEEYFNVRLLDEALQCVEELKSPAYYPEVVKEAISLALDKSPPCVEPVANLLEYLFIKKILSARDIGTGCLLFGSLLDDIGIDLPKSPNNFGEIVGKLILAGGLDFKVVREILKKVEDDRFQKAVFDSAVQVITSASGQAVLDSQASDIEACRSVLK. 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00929 788 Gene3D - 201 437 - -
Seca11g00929 788 Pfam MIF4G domain 210 436 IPR003890 GO:0003723|GO:0005515
Seca11g00929 788 MobiDBLite consensus disorder prediction 530 567 - -
Seca11g00929 788 MobiDBLite consensus disorder prediction 513 616 - -
Seca11g00929 788 MobiDBLite consensus disorder prediction 104 147 - -
Seca11g00929 788 Coils Coil 80 100 - -
Seca11g00929 788 MobiDBLite consensus disorder prediction 1 34 - -
Seca11g00929 788 SUPERFAMILY ARM repeat 203 439 IPR016024 -
Seca11g00929 788 MobiDBLite consensus disorder prediction 107 124 - -
Seca11g00929 788 FunFam Eukaryotic translation initiation factor isoform 4G-2 201 437 - -
Seca11g00929 788 SMART ma3_7 624 736 IPR003891 -
Seca11g00929 788 Gene3D - 617 782 - -
Seca11g00929 788 ProSiteProfiles MI domain profile. 623 745 IPR003891 -
Seca11g00929 788 SUPERFAMILY ARM repeat 619 768 IPR016024 -
Seca11g00929 788 FunFam Eukaryotic translation initiation factor isoform 4G-2 617 778 - -
Seca11g00929 788 SMART if4_15 210 436 IPR003890 GO:0003723|GO:0005515
Seca11g00929 788 Pfam MA3 domain 624 736 IPR003891 -
Seca11g00929 788 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 51 776 IPR045208 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00929 Seca-Chr11 9564270 9570316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00929 1 786 Eukaryotic Initiation Factors Gene Family AT5G57870 66.035 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00929 K03260 - gmx:100781275 1337.01