Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g00908 | ATGGTCGCCGTGAAAAGGTTGAAAGATGTTACTGGTAGTGCTGGTGAATCCCAGTTCCAAACAGAATTGGAGATGATCAGCATGGCAGTTCACCGTAATTTACTTCGCTTAATTGGATGTTGTGCCACTCCTAATGAAAAACTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCCTCCAGGCTTAAAGGTGATATGATAGGCAAACCAGCTTTAGATTGGAATACAAGAAAGAGAATAGCAATTGGAGCTGCCAGAGGCCTCCTGTATCTTCATGAGCAATGCGACCCAAAGATAATACACAGAGATGTAAAGGCCGCTAATGTGCTTCTGGATGACTATTGTGAGGCTGTTGTTGGTGATTTTGGGCTTGCAAAGCTCCTAGATCATGCAGATTCGCATGTCACCACTGCTGTCCGTGGAACTGTTGGACACATTGCACCAGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTATTTGGATTCGGCATTCTCTTGTTAGAGCTCATAACTGGAATGACAGCTCTTGAGTTTGGGAAAACTGTGAATCAGAAAGGTGCTATGCTGGAGTGGGTTAGGAAAATACAGCAAGAAAAGAATGTTGAAGTATTGGTGGACAAAGAGCTGGGGAACAACTATGATAGAATAGAGATAGGGGAGATGCTGCAAGTAGCTTTACTTTGTACACAATATTTGACAGCCCACCGCCCCAAAATGTCTGAAGTGGTCCGAATGCTTGAAGGTGATGGGCTTGCTGAGAAGTGGGCATCATCACATAATTATGGTAGCCACGCCATGAACCCTAGTCACAGTAACTGTAGCAATAGTTCATCCCACCCTACATCTGCTTCAAAACATGATGACAATGTTCATGATCGTTCAAGCATGTTTGGCATGACAATGGATGATGATGATGAACAGTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTAGATAA | 975 | 0.4369 | MVAVKRLKDVTGSAGESQFQTELEMISMAVHRNLLRLIGCCATPNEKLLVYPYMSNGSVASRLKGDMIGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQQEKNVEVLVDKELGNNYDRIEIGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASSHNYGSHAMNPSHSNCSNSSSHPTSASKHDDNVHDRSSMFGMTMDDDDEQSLDSYAMELSGPR. | 325 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g00908 | 324 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 251 | IPR011009 | - | |
Seca11g00908 | 324 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 250 | IPR001245 | GO:0004672|GO:0006468 | |
Seca11g00908 | 324 | ProSiteProfiles | Protein kinase domain profile. | 1 | 236 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g00908 | 324 | MobiDBLite | consensus disorder prediction | 266 | 324 | - | - | |
Seca11g00908 | 324 | SMART | serkin_6 | 1 | 236 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca11g00908 | 324 | MobiDBLite | consensus disorder prediction | 288 | 304 | - | - | |
Seca11g00908 | 324 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 100 | 112 | IPR008271 | GO:0004672|GO:0006468 | |
Seca11g00908 | 324 | MobiDBLite | consensus disorder prediction | 266 | 287 | - | - | |
Seca11g00908 | 324 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 54 | - | - | |
Seca11g00908 | 324 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 1 | 260 | - | - | |
Seca11g00908 | 324 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 54 | 270 | - | - | |
Seca11g00908 | 324 | Gene3D | Transferase(Phosphotransferase) domain 1 | 55 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g00908 | Seca-Chr11 | 9349775 | 9355118 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g00908 | 1 | 324 | Receptor kinase-like Gene Family | AT5G16000 | 71.472 | 2.08e-155 | 447 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Seca11g00908 | PK_Tyr_Ser-Thr | 9.7e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g00908 | - | - | gmx:100797186 | 580.096 |