Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00894 ATGGGTGGTTTAGATGGCCATCTTCCTGTAATGGGTATGATAGGTTTACAAATTCATTATGCAGTGCTTGCTATCTTCACAAGAACTGCTCTGTTAGAAGGATTGAGTCCCACTGTGTTTGTAGTATATAGGCAAGGCATAGCCACTTTGGCATTGGTCCCTATGGTTTTTTCTCCTAAGCGGAGACAATCTTTAAAGATCTCATTGAGATTAAAGAGCTTCTCTTTGATGTTTGTGACCTCTCTTATTGGGGTTACAGCCAATCAGAATGCATATTTTAAAGGTTTATATTATTCATCTTCTACAGCAGCTACTGCAATGAGTAATCTGATACCCGCTTTAACTTTTGTAATTGCAGCAATTTTGGGATTTGAGAAAATTGATGTAAGAAGCATAAGAAGTATGGCCAAGATATTAGGGACAGTTTGTTGTGTGAGTGGAGCATTAACTATGGCACTGCTCAAAGGACAAAAGGTGTTACACATGGTCATGGAGTTCCTTCCTTCTATGCATCTCACTGCTAGTGGAGGTGAGAATTGGCTGCTGGGTTGTCTATTGCTCTTAGCAAGTAGTGTTTTTTGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCAAGCTGCCCAGACCATTTATTATCAACCTTTTGGATGTGTTTCTTTGCAACAATACAGTCAGCCATATTTGCACTGCTCTTTGAGCAGGATCTTCAAGCATGGATTTTACATTCACCTCTGGAATTCTCATGCTGTTTATATGCAGGAGTTGGAATTGCAGTTAGCTTCTTTGTTCAATCCTGGTGCATCTCATTAAGAGGTCCCCTATACTGTGCAATGTTCAACCCTCTAGCAACAGTCATCACAGCTTTCATAGCTGCTACATTCCTACAGGAAGAGCTATACATTGGAAGTTTGATAGGGGCTGTTGGAGTGATCACTGGTTTATATATTGTGCTGTGGGGTAAAGCCAAAGACTTTGATGGGATTAAACAAGAGGCAGCACAATCAAACACGCATGATAATGAGATAAGTAGCAGGATTGATTTGGAACAACCGCTTCTATCAGAGAAGTCAGAACATGTACCAGAGAGCAAGATGGAGCCATGA 1107 0.4065 MGGLDGHLPVMGMIGLQIHYAVLAIFTRTALLEGLSPTVFVVYRQGIATLALVPMVFSPKRRQSLKISLRLKSFSLMFVTSLIGVTANQNAYFKGLYYSSSTAATAMSNLIPALTFVIAAILGFEKIDVRSIRSMAKILGTVCCVSGALTMALLKGQKVLHMVMEFLPSMHLTASGGENWLLGCLLLLASSVFWSCWMIMQVPISSSCPDHLLSTFWMCFFATIQSAIFALLFEQDLQAWILHSPLEFSCCLYAGVGIAVSFFVQSWCISLRGPLYCAMFNPLATVITAFIAATFLQEELYIGSLIGAVGVITGLYIVLWGKAKDFDGIKQEAAQSNTHDNEISSRIDLEQPLLSEKSEHVPESKMEP. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00894 368 Pfam EamA-like transporter family 10 143 IPR000620 GO:0016020
Seca11g00894 368 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020
Seca11g00894 368 PANTHER WAT1-RELATED PROTEIN 8 326 IPR030184 GO:0016020|GO:0022857
Seca11g00894 368 MobiDBLite consensus disorder prediction 334 368 - -
Seca11g00894 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 145 - -
Seca11g00894 368 MobiDBLite consensus disorder prediction 352 368 - -
Seca11g00894 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00894 Seca-Chr11 9190234 9192257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00894 1 356 Nodulin-like Gene Family AT4G30420 46.900 4.44e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00894 - - gmx:100816384 551.977