Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00887 ATGAATGCAATCCATAAGGTTTATAAGATTTCAAAAGCACAAACACTTATAGCATTATTGAGTATTGTGCCAGGTTACCGGTTCACAGTAGCATTCATTGATTACATGGGTCGTTTTGCCATCCAATTTATTGGTTTCTTTTTCATGACTGTCTTCATGTATGCTCTGGCCATACCATATGATTATTGGACCAAGAAAGAAAACAGAATTGGGTTTGTGGCGATGTACTCGCTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATACTCCCAGCAAGGCTAAGGTCTACTTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGAGTAA 357 0.4118 MNAIHKVYKISKAQTLIALLSIVPGYRFTVAFIDYMGRFAIQFIGFFFMTVFMYALAIPYDYWTKKENRIGFVAMYSLTFFFANFGPNATTFVVPAEILPARLRSTCHGISAAAGKAE. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00887 118 Gene3D MFS general substrate transporter like domains 1 118 IPR036259 -
Seca11g00887 118 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 14 116 - -
Seca11g00887 118 Pfam Sugar (and other) transporter 30 115 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca11g00887 118 SUPERFAMILY MFS general substrate transporter 16 115 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00887 Seca-Chr11 9139608 9139964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00887 1 116 Inorganic Solute Cotransporters AT3G54700 84.483 4.55e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00887 K08176 - lja:Lj6g3v0030000.1 213.772