Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00885 ATGCGAAATATGAGTTCAGTGAAGCAAGAATTTCTCCGTAAATGGATAACAGGACTGAGAAAATGTAGCTGTGAGAAGAAGAACATGAGTTTGATGGAGAGAAAGAAGGCCATAAAGCGTTCTGCAGATTTAGCCATGGCTTCCACCAGAGACAAAGCCACTCGCTGGAGCCGTGCTCTTATTGCCAATGCTTCCACAGATGATGCTGCAGACAGCAACATGTTAGCCTCGCTACCACCACGGCAACAGAGAGTAATTAGGAAAAGCTTCACGAATTCATCATCATCACCACTTCTTCACATCAAAAGGATTAGAAGCAGAAAGATTTTGAGAAGAAAGCGTACGGTCCAAAGAGGAAAGGAAAGGGTGGTGGCGAGTGTGATAGCGAAAAAACTTGTTGAGAAAAGAACAAGAAGGCTCAAGAGTCTGTTACCAGGGGGAGAATTCATGGATGACGTGTCTTTGGTTGAGGAAACCCTAGATTATATCCAATCCCTCACAGCTCAAGTTGAAGTTATGAGATGTCTTGTCACTGCCTCAGAGCTCATCATAAATCCACCCTAA 564 0.4397 MRNMSSVKQEFLRKWITGLRKCSCEKKNMSLMERKKAIKRSADLAMASTRDKATRWSRALIANASTDDAADSNMLASLPPRQQRVIRKSFTNSSSSPLLHIKRIRSRKILRRKRTVQRGKERVVASVIAKKLVEKRTRRLKSLLPGGEFMDDVSLVEETLDYIQSLTAQVEVMRCLVTASELIINPP. 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00885 187 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 4 178 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00885 Seca-Chr11 9125418 9126559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00885 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 44.565 5.23e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00885 - - lja:Lj0g3v0101119.1 224.942