Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00881 ATGTTTTACTGTCAGGTCACTGGAGCTGATATCACAAGGGCATACCTCAGCAATGTATGTGTTGCTAGTGAACTGCACAGAAACGGGTTGGGCTATGCACTTCTTGAAAAGTCCAAGTTAGTTGCTCATGACTGGGGCATAACAGATTTATACGTCCATGTTGCTGTTGACAATGAACCAGCCAAAAAGTTGTATACAAAGAGTGGGTTCGTCTATGAAAGTGACGAACCTGCGTGGCAGGCCAGGTTTCTAGATCGACCCCGAAGACTTCTCCTATGGACAGGTCTTTCAAGCACCTAA 300 0.4567 MFYCQVTGADITRAYLSNVCVASELHRNGLGYALLEKSKLVAHDWGITDLYVHVAVDNEPAKKLYTKSGFVYESDEPAWQARFLDRPRRLLLWTGLSST. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00881 99 PANTHER OS08G0260000 PROTEIN 6 99 - -
Seca11g00881 99 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 89 IPR000182 GO:0016747
Seca11g00881 99 CDD NAT_SF 13 53 - -
Seca11g00881 99 Gene3D - 1 89 - -
Seca11g00881 99 Pfam Acetyltransferase (GNAT) family 12 70 IPR000182 GO:0016747
Seca11g00881 99 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 75 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00881 Seca-Chr11 9105985 9107869 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca11g00881 Acetyltransf_1 7.5e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00881 - - gmx:100802268 182.185