Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00876 ATGGATGCGCATGCCAAGAAAAAGGCGTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAGCGCATAGAATCTCCCCTCGTGAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGATGTTGTTTTGAAGTCTGAGTCTATTTGGGATGCACACCAAGTTTCTCGTAAGCATCGAGAGGCAATAAGTAATCTTAAAGCCAATGCAGCTGGATTAACTCAGCATAACAATGCAAAGCCTGACATTCCCAAGGCTAAACCAGAACAGCCTTCTGAGTCACAATCCAAAATACCCCAATGTTCACAAGAAGTGGCTAAACCTCAGTCATCATCGGTGCTTCCACCTAATTTTTTTGATGACAGTGATGCAAGAAAGGCAAGATCTGAAAAGAACTCTTCCCATTTGGTGGACTCAGATTTAGGTAGAAAGGCAGGGGTTTCTGCTCAAACTCAGGTGTTAAACTTGGAGAAAGAGAAAGTTAACTTTCATGGCAATAATACTGCAAAGTCAAAGGTTAGCCAAGCAACAATGGAGATTAGGCAGACATCAGTCAAGGCTACAGATACAGGGATCAATCAAGTAAAAGGGGCTCTGCCTGAAGGCTTTTTTGATAATAAGGAAGCTGATTTGAAGGCACGTGGTATAAAGCCTGTTAAGCCAGATGTCAAAGATGAATACAAGGAATTTGAGAAGTTGATTCAAGAGGACTTGAAGGAGGTTGATGACCGTATGGAGGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCTGTAGAGCAAAAAGTCTTCAGGGAGAAAGTGGAAATGTTGAAGAAGAAGAGATTGGAGCTCAAGGCTTCTAAACCTGCAAAGCGTAGTAAATCTTCTGAGGTTGTGACCAAGGAGTCTAGACATGAAGAGTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCCGTGGACTGGAGAGCACAACACTTGTGA 981 0.423 MDAHAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESIWDAHQVSRKHREAISNLKANAAGLTQHNNAKPDIPKAKPEQPSESQSKIPQCSQEVAKPQSSSVLPPNFFDDSDARKARSEKNSSHLVDSDLGRKAGVSAQTQVLNLEKEKVNFHGNNTAKSKVSQATMEIRQTSVKATDTGINQVKGALPEGFFDNKEADLKARGIKPVKPDVKDEYKEFEKLIQEDLKEVDDRMEEEEIDAAEMIEEAESVEQKVFREKVEMLKKKRLELKASKPAKRSKSSEVVTKESRHEESSSDDESGENFAVDWRAQHL. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00876 326 Pfam Zinc-finger of C2H2 type 39 61 - -
Seca11g00876 326 MobiDBLite consensus disorder prediction 123 140 - -
Seca11g00876 326 MobiDBLite consensus disorder prediction 284 326 - -
Seca11g00876 326 Coils Coil 233 267 - -
Seca11g00876 326 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Seca11g00876 326 MobiDBLite consensus disorder prediction 73 145 - -
Seca11g00876 326 PANTHER UNCHARACTERIZED 1 326 IPR040050 GO:0003676|GO:0005681|GO:0008270
Seca11g00876 326 MobiDBLite consensus disorder prediction 284 318 - -
Seca11g00876 326 MobiDBLite consensus disorder prediction 91 119 - -
Seca11g00876 326 Gene3D Classic Zinc Finger 32 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00876 Seca-Chr11 9090279 9099218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00876 1 326 C2H2 Transcription Factor Family AT3G02860 51.488 7.99e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00876 K13104 - gmx:100808515 484.952