LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca11g00837	ATGTCAAACAAGATGTGGGAGGCTCTCTTAGAGCATGCAAAGACATGTGTTCTAGGAGGGAAGCTCTATGTTTATTATCCAGAAGATTCAAGAAATGTTGGTGTTATTTTTAACCACATCTATGAGCTGCGCGGCCTTATAACTGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGATTCATTGGTGAAGAAGGCATATGACAATTGGGAACAGGTTGTAGAGTATGATGGCAAATCACTCGTGAATGTGAATCAAAATAATAGCTCTGTTGAATCTGAAAATGAACTTCCCGTTGAGTCAATTGATTATGGTAGTGGTTTAGATCATCAACTGCAACTGCCAACCCTCCCAGTTTCCGTTCCTTCTGAACAGCAAATAAATTCAGGGATGCCAGTTGGAGGTTATAACAATAATATGGTAACAAGATACCCAACCCAGTCATTAATCACAAACTCCAGTTCCCGGAGTCAGTTTGATGGCTCATTGTATCTGTCTAATGACCAATTAATAAGCAATGTTCACCAACCCCAAAGCACTAGAAATGATAATGGCACAGTTGGGTTAGCTCTCGGCCCTCCTCAATCATCGACATCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCAGTCTACCTTAAATCCTTTTGATGATTGGTCACACAGCAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTTAGAAGTCATGAGATGCTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATGCCTCCATGAATGCTGAGGATGGCTATTCATACCCATCATTCATGCAATCTCCGATGCCAAACTTTGATGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAGGCGGGCACAGATAGAGGAGTTAGATGAATAG	1002	0.4341	MSNKMWEALLEHAKTCVLGGKLYVYYPEDSRNVGVIFNHIYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWEQVVEYDGKSLVNVNQNNSSVESENELPVESIDYGSGLDHQLQLPTLPVSVPSEQQINSGMPVGGYNNNMVTRYPTQSLITNSSSRSQFDGSLYLSNDQLISNVHQPQSTRNDNGTVGLALGPPQSSTSGFHAGSSSIQQSTLNPFDDWSHSRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHASMNAEDGYSYPSFMQSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAERRAQIEELDE.	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca11g00837	333	PANTHER	OS02G0177800 PROTEIN	1	256	IPR012416	GO:0005516
	Seca11g00837	333	Pfam	Calmodulin binding protein C-terminal domain	21	83	IPR046829	-
	Seca11g00837	333	MobiDBLite	consensus disorder prediction	183	224	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca11g00837	Seca-Chr11	8546973	8549387	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca11g00837	1	328	Calmodulin-binding Proteins	AT5G57580	57.522	4.91e-130	384

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca11g00837	-		-	cam:101488801	575.089