Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00828 ATGGAACCGACACACCTTCATCGTGACTTCATTTTCCGTTCCAAACTCCCTGACATTTACATCCCAACGCACCTCCCACTCCACACTTACTGCTTCCAAAACCTTTCCCAATTCAGAGACCGTCCATGCCTCATCAACGCTAACACCGGCGAGACCTTCACCTATGCTGACGTGGAACTCACCGCCCGCAAAGTCGCCGCCGGACTCAACAACCTAGGCATCCAACAAGGCGACGTCATCCTCCTCCTCCTCCAGAATTGCCCCCAATTCGTCTTCGCATTCCTCGGCGCCTCCTACCGCGGCGCCACCGTCACCACCGCCAACCCGTTCTACACTCCGGCGGAGGTGGCAAAACAAGCCACTGCCTCCAACGCAAAGCTCATCATAACTCAATCCTCATACATTGACAAAGTGAAGGATTTTGCCAGAGACAATGACATCAAAGTGATGTGCATTGACTCGCCGCCGGAAGGTTTTTTACATTTCTCGGAAATAACGGAGGCTGACGAGGCTGACATTCCCGCAGTGAAAATTTCCCCAGACGACGTCGTTGCGCTGCCGTATTCGTCTGGCACAACAGGGCTTCCCAAAGGGGTTATGTTAACCCACAAAGGATTGGTTACTAGCGTGGCGCAACAGGTTGATGGGGAGAATCCGAACCTGTATTTCCACAGCAAGGATGTGTTGCTGTGCGTGCTGCCACTCTTTCACATTTATTCGCTTAACTCTGTTTTGCTCTGTGGTCTTCGAGTTGGCGCTGCCATTCTCATCATGCAGAAATTTGAGATCGTTTCGCTGTTGGAGTCTGTGCAGAAACACAAGGTGAGCATTGCGCCGTTTGTGCCACCCATCGTTTTGGCGATTGCTAACAGCCCTGAGGTGGAACGATACGACTTGTCGTCTATTCGGATGATTATGTCTGGTGCGGCGCCTATGGGAAAGGAACTTGAGGATGCTGTCAGGGCCAAGCTTCCCGACGCTACGTTCGGTCAGGGTTACGGGATGACAGAGGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCAAAGGAGCCAGTGGAGGTGAAATCAGGTGCATGTGGGACAGTTGTAAGAAACGCAGATATGAAGATCGTTGACCCTGAGACGGGCGCTTCGCTTCCAAGGAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGTTATTGTTTGCCATGTTTGGGCAGGTTATCTAAATGACACGGAGGCGACAAAAAGAACTATAGACAAAGAGGGATGGTTGCATACAGGTGATATTGGTTATATTGATGATAATGATGAGCTTTTCATCGTTGATAGGTTGAAGGAGCTGATCAAATACAAAGGGTTTCAAGTGGCTCCAGCTGAGCTCGAAGCCATGCTGATTGCTCACCCAAACATTTCTGATGCTGCTGTTGTACCCATGAAAGATGAGGCTGCAGGAGAAGTTCCGGTTGCATTTGTTGTACGATCAAACGGTTCTAAAATCTCAGAGGATGAAATCAAGCTATATATATCAAAACAGGTTGTGTTTTACAAGAGAATCAATAAGGTTTTCTTTGTGGGCTCAATTCCGAAGGCACCCTCAGGCAAGATTTTGCGGAAAGACCTCAGGGCAAGGCTTGCGACCGGTCTCGTTATTTAG 1653 0.4943 MEPTHLHRDFIFRSKLPDIYIPTHLPLHTYCFQNLSQFRDRPCLINANTGETFTYADVELTARKVAAGLNNLGIQQGDVILLLLQNCPQFVFAFLGASYRGATVTTANPFYTPAEVAKQATASNAKLIITQSSYIDKVKDFARDNDIKVMCIDSPPEGFLHFSEITEADEADIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSKDVLLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFEIVSLLESVQKHKVSIAPFVPPIVLAIANSPEVERYDLSSIRMIMSGAAPMGKELEDAVRAKLPDATFGQGYGMTEAGPVLSMCLAFAKEPVEVKSGACGTVVRNADMKIVDPETGASLPRNQAGEICIRGNQIMKVIVCHVWAGYLNDTEATKRTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKISEDEIKLYISKQVVFYKRINKVFFVGSIPKAPSGKILRKDLRARLATGLVI. 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00828 550 Gene3D - 445 546 IPR045851 -
Seca11g00828 550 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Seca11g00828 550 CDD 4CL 21 540 - -
Seca11g00828 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 542 - -
Seca11g00828 550 Gene3D - 4 444 IPR042099 -
Seca11g00828 550 Pfam AMP-binding enzyme 34 450 IPR000873 -
Seca11g00828 550 SUPERFAMILY Acetyl-CoA synthetase-like 7 546 - -
Seca11g00828 550 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Seca11g00828 550 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Seca11g00828 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00828 Seca-Chr11 8442845 8449373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00828 7 512 Monolignol Biosynthesis Gene Families AT1G51680 70.097 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00828 K01904 - gmx:100779668 941.414