Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00806 ATGTATGTGCGGCTACATGGACACTTGAGAAGTCTTCAGGGTAAAAGGACCTTAAATGTTTTCTCTTTTAGGCCTGTGACCGACTTCAATGAGGTTGCCACCCATTTCATTGACTGCATATATGTTCATCTCTATAATTCCAGGTTACGGCATCTTCAAGCTAGTGTCCCTATTCAGCAACATGTTGCTAATTCTGCACCAATTACTCCCACAAAAGGTTATCAAGCTCAAGCTGTCCCACCAAATCAATTTTCTGGTCAACATAACAATGGTCAGAAGAGTGTTGAACTTATGATTTTAGATATTTTACATCTCCCCACAAACAGGTCAAGGGATGAGGGAGTCCATCGTGATCTTATTGCACAGCATCTTGGAATTCCTTTGGATAAGCTCATGCTGGCTATTAAAAATCTTATTCAGGAAGGCGAGATTTATGAAGCTATAGCTGATCACTATAAGTCAATCGTCAATGGTTGA 477 0.4025 MYVRLHGHLRSLQGKRTLNVFSFRPVTDFNEVATHFIDCIYVHLYNSRLRHLQASVPIQQHVANSAPITPTKGYQAQAVPPNQFSGQHNNGQKSVELMILDILHLPTNRSRDEGVHRDLIAQHLGIPLDKLMLAIKNLIQEGEIYEAIADHYKSIVNG. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00806 158 Gene3D - 87 156 IPR036388 -
Seca11g00806 158 SUPERFAMILY Nucleic acid-binding proteins 1 47 IPR012340 -
Seca11g00806 158 SUPERFAMILY "Winged helix" DNA-binding domain 92 155 IPR036390 -
Seca11g00806 158 PANTHER REPLICATION PROTEIN A-RELATED 1 155 IPR040260 -
Seca11g00806 158 Gene3D - 1 49 IPR012340 -
Seca11g00806 158 Pfam Replication protein A C terminal 43 150 IPR014892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00806 Seca-Chr11 8145277 8154507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00806 1 106 Core DNA Replication Machinery Family AT3G02920 48.182 2.21e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00806 K10739 - gmx:100782819 229.95