Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00785 ATGGGAGCTCCTACCTTTGTTGTCTTATCTTTGCTTCTTCTCCTGAGTAGTACTACAAGCTCAGCTCAACTCACTCGTGGCTTCTACAACAAAATATGCCCCAATGTTGAGCAGTATGTGCGTTCTGCAGTGACGCAGAAGTTCCAACAGACCTTTGTGACTGCCCCTGCCACTCTTCGACTCTTCTTCCATGATTGTTTTGTGCGGCAGGGTTGTGATGCTTCGGTTTTGCTTGCATCACCAAATAATAAGGCAGAGAAGGATCATCCTGATGATATATCACTAGCTGGGGATGGCTTTGATACTGTGGTTAAGGCCAAGGCAGCTGTTGATAGGGATCCTCAGTGCCGAAACAAAGTCTCTTGTGCTGATATTCTTGCTCTAGCTACTAGGGATGTTGTCAATTTGGCAGGGGGGCCATTTTATAATGTTGAATTGGGAAGGCGTGACGGGAGAATATCTACTATTGCCAGTGTTCAACACAGTCTTCCTAGCCCTAATTTCAATTTGGATCAGCTCAATACCATGTTCAGCTCTCATGGCCTCTCCCAGACAGATTTGGTTGCATTATCAGGTGCACATACAATTGGATTCTCTCACTGTAACCGTTTCTCAAACAGAATCTACAACTTCAGCCCCAGAAGCAGAATTGACCCAACATTAAATTTACAATATGCTTTCCAGCTTAGACAGATGTGCCCTCTGAGAGTTGATCCAAGAATTGCCATAAACATGGACCCTGTAACGCCTCAAAAGTTTGACAATCAATACTTCAAGAATCTGCAGCAAGGAAAGGGTCTCTTCACTTCTGATCAGGTGTTGTTTACAGATGGAAGGTCAAAGGCCACGGTCAACTTATTTGCATCCAATGAAAAAGCTTTTGAGAGTGCCTTTATCAATGCCATTACTAAGTTGGGAAGGGTTGGTGTTAAAACTGGAAATCAAGGTGAAATTAGGATTGATTGCACCAGGCCCAATTAG 981 0.4383 MGAPTFVVLSLLLLLSSTTSSAQLTRGFYNKICPNVEQYVRSAVTQKFQQTFVTAPATLRLFFHDCFVRQGCDASVLLASPNNKAEKDHPDDISLAGDGFDTVVKAKAAVDRDPQCRNKVSCADILALATRDVVNLAGGPFYNVELGRRDGRISTIASVQHSLPSPNFNLDQLNTMFSSHGLSQTDLVALSGAHTIGFSHCNRFSNRIYNFSPRSRIDPTLNLQYAFQLRQMCPLRVDPRIAINMDPVTPQKFDNQYFKNLQQGKGLFTSDQVLFTDGRSKATVNLFASNEKAFESAFINAITKLGRVGVKTGNQGEIRIDCTRPN. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00785 326 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 CDD secretory_peroxidase 23 324 IPR033905 GO:0004601|GO:0042744
Seca11g00785 326 FunFam Peroxidase 164 305 - -
Seca11g00785 326 PANTHER - 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Seca11g00785 326 Pfam Peroxidase 40 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Seca11g00785 326 Gene3D - 27 326 - -
Seca11g00785 326 FunFam Peroxidase 27 174 - -
Seca11g00785 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g00785 326 Gene3D Peroxidase, domain 2 164 305 - -
Seca11g00785 326 SUPERFAMILY Heme-dependent peroxidases 23 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00785 Seca-Chr11 7875503 7877780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00785 5 326 Peroxidase AT2G18980 75.466 0.0 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00785 K00430 - gmx:100804620 551.592