Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00773 ATGTCTTCCCAGGAGAAGAGCAAAATGGGGAAAAAGTTGCAGAAGAGCTATTTCGATGTGTTGGGATTGTGCTGTTCTTCAGAGGTACCACTGATTGAGAACATCCTGAAACCTCTTGAGGGAATTAAAGAGGTTTCAGTCATCGTCCCATCACGAACTGTCATCGTTGTCCATGACAGTCTTGTCATTTCGCAACTTCAAATTGTTAAGGCTCTGAACCAAGCAAGACTAGAAGCGAATATTAGAGTGTATGGGAACGAAAAGCAGCAAAAGAGATGGCCAAGCCCATATTCTGTTGCTTCTGGTTTGCTCCTTGCGTTTTCGTTTCTCAAGTATGTGTATTCTCCCTTGAAATATCTCGCACTTGGAGCAGTTGCTGCAGGCGTCTATCCCATTATCTTAAAGGCTTTTGTCTCCATTCGGAACGTTAGATTTGACATAAACATTCTCATGATCATAGCAGTCATTGGGACAATTGCTATGAACGATTATACGGAAGCTGGCTCCATTGTCTTCCTCTTCTCAATTGCAGAATGGCTGGAGACAAGGGCAAGCTACAAGGCAAATGCAGCAATGTCATCGTTGATGAAGATAGCTCCTCAAAAAGCAGTCATAGCTGAGACAGGGGAAGTTGTGGACGCTGATGAGGTGAAAGTAAACACCATCCTAGCAGTTAAAGCAGGGGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGAAACTGTGAAGTTGACGAGAAAACATTGACTGGGGAATCATTTCCGGTAGCCAAACAAAAGGATTCTGCTGTTTGGGCAGGCACCATCAATTTAAATGGTTATGTTAGTGTGAAAACTACTGCACTAGCTGAAGATTGTGTGGTGGCTAAAATGGCCAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACTAGCACTCAGAGATTGATTGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTGTAGTCATATCAACTCTTGTAGCGGTGATTCCATTTGTATTAAAAGTGCATAACGAGAAACACTGGCTTCACTTTGCACTGGTTATTTTGGTAAGTGCATGTCCATGTGCACTTATCCTTTCAACGCCAGTTGCAACTTTTTGTGCTTATACGAAAGCAGCTACATCAGGTCTTCTCATCAAAGGGGGTGATTATCTTCAAACACTTGCAAAAGTTAAGGTCATGGCTTTTGACAAAACGGGAACCATAACAAAGGGTGAATTTGTGGTGACAAATTTTCAATCTCTCTCAGATGACATTGATTTGAACACATTGGTTTACTGGGTGTCAAGCATTGAGAGCAAGTCAAGCCATCCATTGGCGGCAGCAATTGTTGATTATGGAAGGTCTCTTTCCATTGAACCAAAACCAGAAATGGTGAAGGAATTTGAAAATTTTCCTGGAGAAGGAATATGTGGAAAAATTGATGAGAGAGTTCTTTACATTGGAAACAAAAAAATTGCCACAAGAGCAGGGTCTGAAACAGTTCCCACCTTACAAGGTGAAGCTCAAAGAGGAAAGACCACTGGGTACATATTCTCTGGAGCAACCCCAGTTGGAATATTCTCTCTAGCTGATGCTTGTAGATCAGGGGTTCAGGAGGCAATAGGGCAGCTGAAGTTGTTGGGAATCAAAACCGCTATGCTCACTGGAGATTGTCAATCAGCTGCAATGCAAGCACAGGAGCAGCTTGGTCATGCTCTGGAGTTAGTTCATGCAGAACTTTTGCCAGAGGACAAGTCAAAAATTATCACAGAATTTAAAAAGGAAGGTCCAACAGCCATGATTGGAGATGGTTTAAATGACGCACCTGCATTAGCTACAGCTGATATCGGAATCTCAATGGGAATTTCAGGTTCTGCACTGGCAAGTGAGACAGGCAACATAATTCTTATGTCAAATGACATTAGGAAGATACCAGAAGCCATTAAGCTTGCAAGAAAATCTCATAGGAAAGTGATAGAAAATATTATTTTGTCAGTCATTACTAAGGCTGCGATTCTTGGTTTGGCCATTGCTGGTCATCCAATTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAACATGCTTGTTGGTCATCTTAAACAGCATGTTACTTCTGCGAAAAGGACACAAGCATGGAGGAAAATGTTGTAGATCTTCCACTCAACCACATATCCACAAAAATGGATGTGGTGGTACTAATGGCAGTTCCTCTCACCACCATCACCACCACCACCACCATCAGCATAAGCATCAGCATCAGCATCAACATCAACATCATAGCCATAAACATTGTTGCTCAGACAATACAGAAAAGATATCTCAGCCTCAGAAGTGTGCCTCCCAGACATGTCTCTCAAAGTGTCCACCCTGCCCTTCAAATTCAAGTTTATGTGGAAGTGTTAACCATGTTAACATCATGGTGGATCATGATCAATGTAAGGGAAGTGATAAGTTCCATGAACCAGATCACTGTCATCACAGAAGATGTGACAAGAGTCAAGAAAGAGTCCCGAAGCATGATATTGAAAACAAGGGCTGTTCAGATTCGCATGAATTTATTCTAAATGCAGAAGATAATGATGCAGTTGCAATAGACAGCCATGGTAATTGTTTGGGACATAAGTCCCACGGGGCAAAACACTGTCACAACCAAAATGTTGACCAGGTTACTCCTGACAGCACTTCATTTAGTTCACCTTGCCATCTCAATCTCTCTTGTCAAAAAGAAGGCCAGCAGTTTGCTAAACACTGCCACATGATCCATGGTTGTGAAAATCACAAAGACCATGAATCCAGAAAAATGTTAGGATCCAGTCATGGCATTCAGCATAAAAAATCAGGTTGCCATTCTGATTTTAAGAAGTGTGGGACCGGTGAAATATCCATTGACACCATCAATGAGGATGATGAATCAGCCTCGATTTCTTGTTGTAAAGGCAGCTCAGACACATGTGAGAAATTGCCAGTTGTGTTTGGCTGTGAAAGTTTAGATAAGAGAGAAATTAGTGCATGCTGCAGACATGACGGCTCTTCAAAAGAATCCATGGAATCCTCTATTATGCATGCTTGCGCTAGTTTGGACAAGAGAGAAGTTGGTGGATGTTGCAATAGCTACATGAAGGAATGTTGTGGCAAGCATGGACACTCAGGAGCTGGTTTTGTTGGAGGTTTATCAGAAATTATCACAGAATAG 3177 0.4208 MSSQEKSKMGKKLQKSYFDVLGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDSLVISQLQIVKALNQARLEANIRVYGNEKQQKRWPSPYSVASGLLLAFSFLKYVYSPLKYLALGAVAAGVYPIILKAFVSIRNVRFDINILMIIAVIGTIAMNDYTEAGSIVFLFSIAEWLETRASYKANAAMSSLMKIAPQKAVIAETGEVVDADEVKVNTILAVKAGEVIPIDGVVLDGNCEVDEKTLTGESFPVAKQKDSAVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVVISTLVAVIPFVLKVHNEKHWLHFALVILVSACPCALILSTPVATFCAYTKAATSGLLIKGGDYLQTLAKVKVMAFDKTGTITKGEFVVTNFQSLSDDIDLNTLVYWVSSIESKSSHPLAAAIVDYGRSLSIEPKPEMVKEFENFPGEGICGKIDERVLYIGNKKIATRAGSETVPTLQGEAQRGKTTGYIFSGATPVGIFSLADACRSGVQEAIGQLKLLGIKTAMLTGDCQSAAMQAQEQLGHALELVHAELLPEDKSKIITEFKKEGPTAMIGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKSHRKVIENIILSVITKAAILGLAIAGHPIVWAAVLADVGTCLLVILNSMLLLRKGHKHGGKCCRSSTQPHIHKNGCGGTNGSSSHHHHHHHHHQHKHQHQHQHQHHSHKHCCSDNTEKISQPQKCASQTCLSKCPPCPSNSSLCGSVNHVNIMVDHDQCKGSDKFHEPDHCHHRRCDKSQERVPKHDIENKGCSDSHEFILNAEDNDAVAIDSHGNCLGHKSHGAKHCHNQNVDQVTPDSTSFSSPCHLNLSCQKEGQQFAKHCHMIHGCENHKDHESRKMLGSSHGIQHKKSGCHSDFKKCGTGEISIDTINEDDESASISCCKGSSDTCEKLPVVFGCESLDKREISACCRHDGSSKESMESSIMHACASLDKREVGGCCNSYMKECCGKHGHSGAGFVGGLSEIITE. 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00773 1058 ProSitePatterns Hypothetical cof family signature 2. 596 618 - -
Seca11g00773 1058 SUPERFAMILY Calcium ATPase, transduction domain A 210 295 IPR008250 -
Seca11g00773 1058 Pfam E1-E2 ATPase 206 374 - -
Seca11g00773 1058 MobiDBLite consensus disorder prediction 722 761 - -
Seca11g00773 1058 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 9 702 - -
Seca11g00773 1058 FunFam Copper-transporting ATPase 1, putative 185 299 - -
Seca11g00773 1058 NCBIfam HAD-IC family P-type ATPase 170 673 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca11g00773 1058 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Seca11g00773 1058 SUPERFAMILY HAD-like 395 697 IPR036412 -
Seca11g00773 1058 Gene3D - 184 299 - -
Seca11g00773 1058 SUPERFAMILY HMA, heavy metal-associated domain 10 80 IPR036163 GO:0046872
Seca11g00773 1058 Gene3D - 407 528 IPR023299 GO:0000166
Seca11g00773 1058 NCBIfam heavy metal translocating P-type ATPase 147 699 IPR027256 GO:0006812|GO:0016020|GO:0019829
Seca11g00773 1058 MobiDBLite consensus disorder prediction 731 756 - -
Seca11g00773 1058 Pfam haloacid dehalogenase-like hydrolase 392 610 - -
Seca11g00773 1058 SFLD C1.7: P-type atpase like 379 648 - -
Seca11g00773 1058 PRINTS Copper-transporting ATPase signature 574 591 - -
Seca11g00773 1058 PRINTS Copper-transporting ATPase signature 631 645 - -
Seca11g00773 1058 PRINTS Copper-transporting ATPase signature 187 205 - -
Seca11g00773 1058 PRINTS Copper-transporting ATPase signature 318 332 - -
Seca11g00773 1058 CDD P-type_ATPase_HM 99 698 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 520 531 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 620 632 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 396 410 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Seca11g00773 1058 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Seca11g00773 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 390 IPR023298 -
Seca11g00773 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 398 404 IPR018303 -
Seca11g00773 1058 Gene3D - 388 647 IPR023214 -
Seca11g00773 1058 FunFam Putative cadmium/zinc-transporting ATPase 3 407 528 - -
Seca11g00773 1058 NCBIfam cadmium family heavy metal-translocating P-type ATPase 147 701 - -
Seca11g00773 1058 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Seca11g00773 1058 Gene3D - 10 83 - -
Seca11g00773 1058 SFLD p-type atpase 379 648 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00773 Seca-Chr11 7741741 7752553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00773 11 719 Primary Pumps ATPases AT4G30110 70.282 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00773 K01534 - gmx:100817567 1615.13