Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00759 ATGTTTTTAGAAATGTCTTCGTGTTTGAGTGGAACGGGAGGAAGAACGTATGGATTTGATTTAGATTTTGTTAAATCTCCATCTTCATGGAGTCGAACTTCACAGACATCTTCTTCTCCTTCCTCAACCATCTCTGAATCCAGCAATTCACAATTGGCAATCTCCACCAGAAAACCCAGAACCCCGAGAAAGCGACCTAACCAAACCTACAACGAAGCTGCCGCACTCCTTTCCACAGCATACCCGAACCTGTTCTCTACGAAGAATCTCAAAACACCACCGGCCAATAAATTTTCCAAACCAGAGGCATCGGAAACGTACGAGTCTTCTTCGGAATTGCTCTTACCTTTCAGGGTGTTGGACACCTCATCCTCGTTCTTAATCCAAAGCCCAATCCAACTCAAGCCCAGTTTTGAGCCCAAAGCGGTGAACCTGCAAGATTATAAGCCATGCCAGAGCCCAGGGGAGATAAGCTCCAGAGTGAATTCGCTTGAATTGGACGATGATTGCAGAGAAGATTTCGACGCCGAATCGATTCTCGATGAGGAAATTGAGGAAGGGATCGATAGCATCATGGGGAGTAGGGTTGAGGAGGACTCCAATGGCGCATCTAGTCACCATCCTTGGATTGATTTTGGCGGGAAATTCGATTTCCGGCTTGGATTGCAGAGAGCAGGAGTGAGGGCTCTTCGCCACGTGGATGATGGCAATTGGTGGAATTTTCCGGCAGTTGATATCCTTCAAATCTCGCCCAAAATCAACGGTGGCGGTAGCAAGCCTCCGCCGGAGAAGAAAAAGAAAAAGAAGGTGGTGACGGTGGTGGAGAAACCGAAAGTGGAATTGAACGAAGCGGAATTGCCCAAATCGAACCCTGGTTTGATGTTGAAATTGAATTTCGACGATGTTCGGAATGCTTGGTCTGACCGGGGCTCGCCGTTCTCCGACGATAGCCCCGCCTCCGACGTACCGGGAAGTGACGTCACTGCGCGGCTGTCGCAAATTGATTTGTTATGGGACAATGGAGGAGTGAGGGAAGCTAGCGTGCTGCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCTAAGAAGATCAGATACCAGGTCAGGAAAGTCAACGCAGATCGACGGCCCAGAATGAAGGTATGA 1146 0.4895 MFLEMSSCLSGTGGRTYGFDLDFVKSPSSWSRTSQTSSSPSSTISESSNSQLAISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTPPANKFSKPEASETYESSSELLLPFRVLDTSSSFLIQSPIQLKPSFEPKAVNLQDYKPCQSPGEISSRVNSLELDDDCREDFDAESILDEEIEEGIDSIMGSRVEEDSNGASSHHPWIDFGGKFDFRLGLQRAGVRALRHVDDGNWWNFPAVDILQISPKINGGGSKPPPEKKKKKKVVTVVEKPKVELNEAELPKSNPGLMLKLNFDDVRNAWSDRGSPFSDDSPASDVPGSDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKV. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00759 381 ProSiteProfiles CCT domain profile. 344 381 IPR010402 GO:0005515
Seca11g00759 381 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 5 380 - -
Seca11g00759 381 MobiDBLite consensus disorder prediction 29 67 - -
Seca11g00759 381 MobiDBLite consensus disorder prediction 29 57 - -
Seca11g00759 381 Pfam CCT motif 344 380 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00759 Seca-Chr11 7592282 7595494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00759 293 380 C2C2-CO-like Transcription Factor Family AT1G25440 43.810 2.80e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca11g00759 CCT 2.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00759 - - aprc:113845796 501.516