Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00735 ATGCTAGTAGATCCAGTTAGGGTTCCGATGATGAGGATGGAAGAACAAATAGCTATACAGGAAGCTGCTTCGGCTGGGTTGAAAAGCATGGAGCATCTCATTCGTGTTCTGTCTTCTCAAGCCCCTTCTTCTTCTTCTTCTTCCTCCTCCAATCAACGCCACCGCCTCGATCTCAACAATCTTGACTGCACCGAAATCACCGACTTCACCGTCTCCAAGTTCAAGCAAGTCATCAACTTGTTGAATCGTACCGGTCACGCTCGCTTTCGTCGTGCACCTTCTTCCTCTGCTCCTTCTCAACCTCAATCTGAAAAAATCAACCACCAACCTCACTCAATGACTCTTGATTTTGCAAAACCGCTTCCGGTCAAATCAAATCCCAATAATCCCAATCCTAACCAATCCACCACCGATTTATCCGTTTCTCAATACTCTAAGTCCAAGGACACATACAGCATCTCCAACACCACCTCCTCTTTCATGTCCTCCATCACCGGCGACGGCAGCGTCTCCGACGGCAAGATTGGGCCTGCAATCCTCGCCGCCGGCAAGCCCCCTCTCTCCTCATCGCACAAGAAAAGCTGTCACGACGCTACCCTCTCCGGCAAAGTCTCATCCTCTGGCCAGTGCCATTGCTCCAAGAGAAGGAAATCCCGTGTGAAACGAATGATCCGTGTGCCGGCGATAAGCTCGAAGATTGCTGATATACCAGCAGATGAGTATTCATGGAGGAAGTACGGTCAGAAACCCATCAAGGGGTCACCTTACCCACGTGGTTACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCGAGGAAGCACGTGGAGCGAGCACAAGACGATCCTAACATGCTCATCGTTACCTATGAGGGAGAGCACCGTCACCCGCAAACCACCGGAGCCGCCGCTGCCGGTTTCACCTCTCAGCCTGTTTAA 936 0.5128 MLVDPVRVPMMRMEEQIAIQEAASAGLKSMEHLIRVLSSQAPSSSSSSSSNQRHRLDLNNLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSSSAPSQPQSEKINHQPHSMTLDFAKPLPVKSNPNNPNPNQSTTDLSVSQYSKSKDTYSISNTTSSFMSSITGDGSVSDGKIGPAILAAGKPPLSSSHKKSCHDATLSGKVSSSGQCHCSKRRKSRVKRMIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHPQTTGAAAAGFTSQPV. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00735 311 MobiDBLite consensus disorder prediction 117 144 - -
Seca11g00735 311 SUPERFAMILY WRKY DNA-binding domain 235 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g00735 311 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g00735 311 MobiDBLite consensus disorder prediction 93 108 - -
Seca11g00735 311 Gene3D WRKY domain 220 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca11g00735 311 MobiDBLite consensus disorder prediction 89 108 - -
Seca11g00735 311 FunFam WRKY transcription factor 65 221 298 - -
Seca11g00735 311 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 300 IPR044810 GO:0003700
Seca11g00735 311 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g00735 311 MobiDBLite consensus disorder prediction 128 144 - -
Seca11g00735 311 Pfam WRKY DNA -binding domain 239 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca11g00735 311 Pfam Plant zinc cluster domain 192 235 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00735 Seca-Chr11 7324941 7326212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00735 1 299 WRKY Transcription Factor Family AT2G24570 52.395 2.15e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca11g00735 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00735 - - gmx:732589 433.335