Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00709 ATGGGGGTGGTTTTGGCTCTGATGCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGCTGTTGCAGCCCAAGGATCCAAAGGGTCCATCATATCTCCATCTCCAGTATTCCTTCCTGTCATTCCTCCAGAAACACTTGGTCCTATCAATCATGGAGAGTTAAGGGGAAGCAGTGCACCAAGCTTGCCATCAGATCCAGATGGGCTTGTTATTTCCCCATCTCCAGCAAACTTACATGTGTATCCTTCCCCTATTGAAACACCTGGTTCTTTACACCAAAGAGATTCATGGAGAACCATTTCCCCAAGCTCTCCAGCAGTACCAAATGGGTCAGTCTTTCACCCTCCAAATACATTACCACCTCCTGCATCAGCTCCAATTCCTCGGAAGAGTAAAGACATAGAACCATCCGTATCTCCAAGTTCAAGCCCTATAGCATTATCACCACCAAATGAAGTTGTTCCTTCACCATCAACAGTGCAAGGGAATATACCACCGTCTGTAAAAGCAACTCCACCACCTATTGTTAGGCCTCCCATCTCCACACCAACTGCTCCAGCTCCAGTTGCAATACCTTCTGGCAGATCACCAAAAATTTCACCGGTCAGCCAACCAGCTGAACATGGAAATTTGGCACCTAAAGCTGATGATAGGAATGCAAATAAGAGTCATACTGTAGAGCCAATTTCCCCAGCACCAATTGCAATACCTTCAACCAATTTTCCCAAAAATTCATCACAAAGCCAACCAACTGGACATGGAAGTTTTCCTCCTAAAGAGGGGACAAATGAAGCCCCTGTAGCAGTTAATTTGCCAAAAAAATCACCTGTAAGCCAGCCACCTGAGCATGGAAGCCAGCCACCAAATGTCCATCAAAGGAATGCAAATACAGGTCACACCTTGGAGCCCATTTCACCAGTTGCAATACCTCCTGCAACTGCAACTTCCAAAGAGAATTCAACAGTCAGCCAACCAACTCAACATGGAAGTATTCCACCTAATGTTCATAAAAAGAATACAAATGAAGGTCACACCCCTGGGCCAGTTTCACCAGAATCAGTTGCACCTCCACCATGGAAAGCAGAACATATCCCCCCAGTGGCCCATCCCATTTTCCCAACAATAACTCCATCCATATTATCTGCACCAGCCACGTCACCAAGAAGTGCATTTCCGGTAAATCCACCATTGGTCCATCCAATTGTTCCAGAAGTATCTCCATCAAAATTACCAGCATCTGTTCCCTCTCCCATGTCAACTCCTTCAAGAAGCATTAGTTGGAAAAGTGGTGGAGCACCAGTTGCTGCACCTTTGTACAAAACACCAAAACCACTTCCAGCTGTAATACATTCCCCTGATCAAGCTCCTGCTGCACAAAATGCAACGCAATTGCATCATGCTCCAGAGCCATTGACTTCATCCCCTAAATCTCCTTCCAATAAAGAAAATCATTTTCCTGCATTGTCACCTTCAATCTCATTTTATGAACATCATCACACGAGGAACGTGATTACCAGCCCTGCTCCTGCATCATCATATATGGTCTCTCCTCCCACTTCAAAACACCAAGATAGAGCAATTCCTCCCTCATTGTCGCCGGCAAGTGGACAAAAACATCATGTTCCATTACCAATGAACTCAGTACCATCTTTTCCTCCTAAAGTATCTCCATCTGGGTCTTCTGCCATGAGCCCTGAGATGCCCCTCCTACCTCAAATTCAAGCACTGCCACCCCCACCTCCTAATGAAGATTGTTTATCAACTGTCTGCATAGAGCCTTATGCAACTTCTCCGCCGGGAGTACCTTGCAGATGTGTCTGGCCCATGCGAGTTGGTCTTCGCATTAATGTTCCTCTCTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTTCCACTGGAGTTTTCATGAAGCAAAGTCAAGTTCGAATTATGGGAGCCAATGCAGCAAACCAGCAACCTGAGAAAACTGTTGTCCTTATTGATTTGTTGCCACTTGGGGAAAAGTTTGATAATTCTACAGCCTTTTTGACTTCTGACAGATTTTGGCATAAAAAGGTTGTTATAAAAGCTTCCTACTTTGGAAACTATGATGTTTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATGAGCATGATAGATGGTGGCCCATTTTCCACTGATGACAATAATGGAACGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAAGGTGGACTCAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTTCTAGCAGTTGTTTTATGTACAGCTGCCGCCTGGGTCTTGTTCAAATTCAGAGATCATGCTAGTCAGCCAGCATCAACCCCACGGCTTTCAACACCTTCTCTTATGAAAGCACCAGGTACTGCTCCTGTGTCATTAATTGGAGATGGAGGAGTTGGATCCATTTCTTCGTCATTTCGATCCAGCATTGCTGCTTATACAGGGTCAGCTAAGACTTTCAGTATGAATGACATTGAGAAAGCCACTGATAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGGAGAAGGGACAAAAGTGGCGGTCAAGGTTCTAATGAGGGATGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAAATGCTTAATCGTCTTCACCACAGAAATTTGGTCAAGTTGATTGGTATATGCGCAGAGAATAGCTTCCGCTGCTTGGTTTATGAACTTGTTCCAAATGGCAGTGTGGAATTCCATTTACATGGAGTTGACAAGGAAAACTACAAACTTGATTGGGCTGCTCGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTCTTGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGGACAGCAACTGATGAGGAGAATAGACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACTGGACATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTACTTGAGCTTTTGACGGGAAGAAAACCTGTAGACATGTCACAAGCTCCTGGTCAAGAGAATCTTGTTGCATGGGCTCGTCCACTTCTCACAAGTAAAGAAGGATTGGAAGCAATAATAGACCCATCTCTAGGAGCTGATGTGTCTTTTGTTAGTGTGGCTAAAGTTGCAGCTATTGCTTCAATGTGTGTGCAGCCTGAGGTATCTAACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTGTGTAATGAATGTGAAGAAGCAAAAGAAGATGCAGGTTCAAGAAGTTCTAGCCAGGAGGATTTATCTATTATTTTAGATGAGGGAGTCAGTACTTTTTCTGGACAACTACCAGATAATTTCCAAAGACAATTCTCAGTTACTAACTTTGATTCTGGAGTTGATATTGAAAGAGGCTTGTCAGCATCAGAACTATTCAGTTCATCAGCAAGAATTGGCAGGCCGGAGTCTGGATCATTTAGAAGAAACTCTTATTCAGGTCCTCTGAGAACCGGAAGAAGCAAGAGGTTTTGGCAGATAATTAGAAGGCTTTCTGGTGGTAGTGTCAGTGAACATGGAACCATGTTCAGTTATGAAGCAACCTCTTCTCGGAAAACCCGTTCCCTTGCTCAGGAGCTGACAACTGGAGCAGTGGCATCAGTCTTCTTGGGTTTTGGGTCCTTGTTCCTCTTACTTGCCAGTGGCGTTTATGTCTAA 3855 0.4415 MGVVLALMLQLVKLCIIGFAVAAQGSKGSIISPSPVFLPVIPPETLGPINHGELRGSSAPSLPSDPDGLVISPSPANLHVYPSPIETPGSLHQRDSWRTISPSSPAVPNGSVFHPPNTLPPPASAPIPRKSKDIEPSVSPSSSPIALSPPNEVVPSPSTVQGNIPPSVKATPPPIVRPPISTPTAPAPVAIPSGRSPKISPVSQPAEHGNLAPKADDRNANKSHTVEPISPAPIAIPSTNFPKNSSQSQPTGHGSFPPKEGTNEAPVAVNLPKKSPVSQPPEHGSQPPNVHQRNANTGHTLEPISPVAIPPATATSKENSTVSQPTQHGSIPPNVHKKNTNEGHTPGPVSPESVAPPPWKAEHIPPVAHPIFPTITPSILSAPATSPRSAFPVNPPLVHPIVPEVSPSKLPASVPSPMSTPSRSISWKSGGAPVAAPLYKTPKPLPAVIHSPDQAPAAQNATQLHHAPEPLTSSPKSPSNKENHFPALSPSISFYEHHHTRNVITSPAPASSYMVSPPTSKHQDRAIPPSLSPASGQKHHVPLPMNSVPSFPPKVSPSGSSAMSPEMPLLPQIQALPPPPPNEDCLSTVCIEPYATSPPGVPCRCVWPMRVGLRINVPLYTFFPLVSELASEISTGVFMKQSQVRIMGANAANQQPEKTVVLIDLLPLGEKFDNSTAFLTSDRFWHKKVVIKASYFGNYDVLYVSYPGLPPSPPLPPSSMSMIDGGPFSTDDNNGTTIKPLGVDIQKRQHKGGLSRGIIAIIAVSVFLAVVLCTAAAWVLFKFRDHASQPASTPRLSTPSLMKAPGTAPVSLIGDGGVGSISSSFRSSIAAYTGSAKTFSMNDIEKATDNFHASRILGEGGFGRVYSGILGEGTKVAVKVLMRDDHHGDREFLAEVEMLNRLHHRNLVKLIGICAENSFRCLVYELVPNGSVEFHLHGVDKENYKLDWAARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGLEAIIDPSLGADVSFVSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECEEAKEDAGSRSSSQEDLSIILDEGVSTFSGQLPDNFQRQFSVTNFDSGVDIERGLSASELFSSSARIGRPESGSFRRNSYSGPLRTGRSKRFWQIIRRLSGGSVSEHGTMFSYEATSSRKTRSLAQELTTGAVASVFLGFGSLFLLLASGVYV. 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00709 1284 MobiDBLite consensus disorder prediction 507 526 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 455 487 - -
Seca11g00709 1284 FunFam receptor-like serine/threonine-protein kinase ALE2 824 926 - -
Seca11g00709 1284 Gene3D Transferase(Phosphotransferase) domain 1 927 1150 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 81 362 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 507 540 - -
Seca11g00709 1284 Pfam Oligosaccharyltransferase subunit 5 1240 1284 IPR007915 GO:0006487|GO:0034998
Seca11g00709 1284 ProSiteProfiles Protein kinase domain profile. 851 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00709 1284 MobiDBLite consensus disorder prediction 447 487 - -
Seca11g00709 1284 ProSitePatterns Protein kinases ATP-binding region signature. 857 879 IPR017441 GO:0005524
Seca11g00709 1284 MobiDBLite consensus disorder prediction 312 347 - -
Seca11g00709 1284 FunFam Receptor-like serine/threonine-protein kinase ALE2 927 1145 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 135 166 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 284 301 - -
Seca11g00709 1284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 973 985 IPR008271 GO:0004672|GO:0006468
Seca11g00709 1284 MobiDBLite consensus disorder prediction 89 111 - -
Seca11g00709 1284 Gene3D Phosphorylase Kinase; domain 1 823 926 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 237 256 - -
Seca11g00709 1284 CDD STKc_IRAK 857 1125 - -
Seca11g00709 1284 Pfam Protein tyrosine and serine/threonine kinase 853 1123 IPR001245 GO:0004672|GO:0006468
Seca11g00709 1284 PANTHER OS01G0750732 PROTEIN 577 1150 - -
Seca11g00709 1284 MobiDBLite consensus disorder prediction 167 186 - -
Seca11g00709 1284 SUPERFAMILY Protein kinase-like (PK-like) 831 1124 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00709 Seca-Chr11 7047612 7060728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00709 338 1240 Receptor kinase-like Gene Family AT5G56890 55.180 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca11g00709 PK_Tyr_Ser-Thr 9.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00709 - - gmx:100816296 1781.15