Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00679 ATGGAGGAAATATCTTCCAGTGTTGCAGTGCCATTTACACTTGGAAACTTGATTCAAAAGGAGTCTGCAGTGACGACCCACATGGAGATAACTGGGATAAAGCTTATGGCAAATACAGCGGCAGCTTTAATATTGAGTCCTGCTGTTGAGGGTAGTCAATCATATTCTGTTGGAAGTGAAAACCATGCTGATGTTAGTCTGCAACACCAAATTACTGTTTCTGCAGAGGTTAAGGAAAATCAAGTTGGAGGTGTCTCGGAAATGGTTATTGAATGTGAAAGTAATTGGGTCTTGACTGAAAGCCATGATGAGGCAAGGAAGGAAGATGAATTCATGTTAGCTGTGGATTTTCAGTGTCTACATAATCCAAACTCTCAATCTGTGCCTAATGACAAAAGTGGTCCTTGTGGGGAGGAAGATGCATCCTTGAAGACTATTTATTCTGAAATTGATTCACCAATTATTATCAAGGTTGATGATAACACCTATGGTAAGTCTGGTATAAACGAGCCTCTTCCAACATTAAAGCCAGAGCAGAACTCAGTTTCTGTTGCAATGGATATTGAGAGTGAAAATCGAAGTGGATCAGATGAGTCTGATCCACAACTATCTGCTGTGCCTCTTGATCAGTTGCCAAAGGAGAACAGAACATGGAGAACAAGTTACCAGAGTGCTTTGGAATTGAGTAGTGGCCCTCTTTGGGGTTCCTCATCAATTTGTGGAAATAGACAGGAGATGGAAGATGCTATTTTTGTTAAGCCTCAACTTTTTCAAGTACCTTCACAGATGTTAATGAATGACCATGTGAATGAAAACACAAAATGCTCACTAGCACACTTTTTTGGTGTCTATGATGGACATGGGGGTTTTCAGGTTGCTAATCACTGCCGGGAACGTCTTCATTCAGTTTTGATTGAGGAGATAGAAGCTGCACAACCAACTTTGGTTGAAACAAATGGGATAGATGATTGGCAGGACCATTGGAAGAAAGCATTCTCCAATTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAATTGGTGCAGGTAATAGTGAAAACAACAGTGATGATGGATCTGAGTCAAATATTGAACCTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAGTCAAACTCACATAATAGTTGCGAATTGTGGGGATTCAAGAGCTGTCTTGTATCGTGGGAAAGAAGCCCTGCCATTGTCTGCTGATCACAAACCAAATCGAGAGGATGAGCGGGAGAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATATTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTGTGCGGCGAGAGAAAAATGATGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGTGATGTTGCAAGGAAGAGAATCCTTCTTTGGCATAAAAAGTATGGCAACAATGGAACAACAGGACAAAGTGAAGGGGTTGATCCTGCAGCTCAATCAGCTGCAGACTATCTATGTAGACTTGCCCTCCACAGAGGAAGCGATGATAACATCTCTGTAATTGTTATAGATTTAAAGGCTCAAAGAAAATTTAAGAGAAAGGCATAA 1674 0.4128 MEEISSSVAVPFTLGNLIQKESAVTTHMEITGIKLMANTAAALILSPAVEGSQSYSVGSENHADVSLQHQITVSAEVKENQVGGVSEMVIECESNWVLTESHDEARKEDEFMLAVDFQCLHNPNSQSVPNDKSGPCGEEDASLKTIYSEIDSPIIIKVDDNTYGKSGINEPLPTLKPEQNSVSVAMDIESENRSGSDESDPQLSAVPLDQLPKENRTWRTSYQSALELSSGPLWGSSSICGNRQEMEDAIFVKPQLFQVPSQMLMNDHVNENTKCSLAHFFGVYDGHGGFQVANHCRERLHSVLIEEIEAAQPTLVETNGIDDWQDHWKKAFSNCFQKVDDEVGGIGAGNSENNSDDGSESNIEPLAPETAGSTAVVAILSQTHIIVANCGDSRAVLYRGKEALPLSADHKPNREDERERIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACDVARKRILLWHKKYGNNGTTGQSEGVDPAAQSAADYLCRLALHRGSDDNISVIVIDLKAQRKFKRKA. 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00679 557 CDD PP2Cc 235 547 IPR001932 -
Seca11g00679 557 MobiDBLite consensus disorder prediction 189 211 - -
Seca11g00679 557 Pfam Protein phosphatase 2C 236 540 IPR001932 -
Seca11g00679 557 PANTHER PROTEIN PHOSPHATASE 198 547 IPR015655 GO:0004722|GO:0006470
Seca11g00679 557 ProSiteProfiles PPM-type phosphatase domain profile. 233 547 IPR001932 -
Seca11g00679 557 SMART PP2C_SIG_2 264 547 IPR001932 -
Seca11g00679 557 MobiDBLite consensus disorder prediction 346 366 - -
Seca11g00679 557 SUPERFAMILY PP2C-like 228 548 IPR036457 -
Seca11g00679 557 Gene3D - 221 557 IPR036457 -
Seca11g00679 557 SMART PP2C_4 223 545 IPR001932 -
Seca11g00679 557 ProSitePatterns PPM-type phosphatase domain signature. 280 288 IPR000222 GO:0043169
Seca11g00679 557 FunFam Protein phosphatase 2C 16 221 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00679 Seca-Chr11 6708104 6711879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00679 210 557 PP2C-type Phosphatase Gene Family AT1G17550 56.250 1.02e-134 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00679 K14497 - gmx:100789207 818.15