Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00677 ATGTATGCATTCTTCACAATTCAGGTAATTCAAATGAATATTGAGGAGTCTATGCGCAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTAGCTGATCTTCTGAAGAAAGTAAAAACAATTCCGGAGCCTTATCTTGCTGCCATTTGTAAGCAGGTGCTGAATGGTTTAATGTATCTTCACCATGAAAGACATATTATCCACAGAGACTTAAAACCTTCTAATTTGCTGATAAATCATAGAGGTGAAGTAAAGATTACTGACTTTGGTGTAAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACATACAACTATATGTCTGTGAGTAAAATATGCAAGCATATATATCATTTTACCACCAAAATCTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTAGAGTGTGCTATGGGGCGGTTTCCATATACACCACCAGATCAAAGTGAAAGATGGGAAAGTATTTTTGAGCTTATTGAAACTATCGTTGATCATCCTCCTCCTACTGCTCCATCCGAACAATTTTCTACAGAATTTTGCTCATTTGTCTCTGCATGGTAA 675 0.3644 MYAFFTIQVIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPYLAAICKQVLNGLMYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTYNYMSVSKICKHIYHFTTKIYKSDIWSLGLILLECAMGRFPYTPPDQSERWESIFELIETIVDHPPPTAPSEQFSTEFCSFVSAW. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00677 224 Gene3D Transferase(Phosphotransferase) domain 1 59 224 - -
Seca11g00677 224 SMART serkin_6 4 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00677 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Seca11g00677 224 Pfam Protein kinase domain 12 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g00677 224 Gene3D Phosphorylase Kinase; domain 1 3 58 - -
Seca11g00677 224 SUPERFAMILY Protein kinase-like (PK-like) 7 221 IPR011009 -
Seca11g00677 224 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 8 223 - -
Seca11g00677 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00677 Seca-Chr11 6705168 6706602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00677 4 222 MAP Kinase Kinase Gene Family AT4G29810 68.950 2.63e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Seca11g00677 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00677 K20603 - gmx:100789734 379.407