Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00656 ATGTCGGTGAATCTAACGCCGAATGCGATCCCGGCGATAGTAGCCGGCGACATGAACTCGAAACCGTTGGTGCAGGTTCTGGATATCAAGTTGATTTCGAATAACAAGCAGCAGGAGAGGTACCGCATTTTGCTCTCTGATGCTGTTTCCTCTCAGCACGCCATGCTCGCCACTCAGCTCAACGATCGAATCCGAACCGGACGAGTTAAGAAAGGTTCCGTCGTTCAGCTGATCGAGTACATTTGCAGTCCTATTCAGAACCGCAAGTCAGTCTTTCATTCCTACACTTATTTTTACATTTGA 303 0.4818 MSVNLTPNAIPAIVAGDMNSKPLVQVLDIKLISNNKQQERYRILLSDAVSSQHAMLATQLNDRIRTGRVKKGSVVQLIEYICSPIQNRKSVFHSYTYFYI. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00656 100 CDD RPA1N 9 89 IPR007199 GO:0003677|GO:0005634|GO:0006260
Seca11g00656 100 Gene3D - 3 96 IPR012340 -
Seca11g00656 100 FunFam Replication protein A subunit 4 92 - -
Seca11g00656 100 Pfam Replication factor-A protein 1, N-terminal domain 5 90 IPR007199 GO:0003677|GO:0005634|GO:0006260
Seca11g00656 100 SUPERFAMILY Nucleic acid-binding proteins 1 91 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00656 Seca-Chr11 6561045 6561347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00656 26 89 Core DNA Replication Machinery Family AT2G06510 60.606 1.28e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00656 K07466 - zju:107409151 144.821