Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00646 ATGATGAATGGAAGGAACAAGTTCCCCTTTACTCCATCCCAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTACAAATACATGGCTTCAGGTATTTCCATCCCACCTGATCTTCTCTTCACCATCAAAAGAAGCTACTTGGACTCTCCTCTCTCTTCAAGGCTTTTGTCTCACCACCCTCAACACTTTGGGTGGAACTATTTGCCAATGGGCTTGGGAAGGAAAATAGACCCAGAACCAGGGAGGTGTAGAAGAACAGATGGAAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACATCAACACCAACAACAACAAACACAGATCATGCTTCAACCCCCACAACAATCTTATCAATCACAAAAAATAGTCCTTCTTCTGCACTAACCCAAACCACTCATTCTCTCTCACCTCTTACATCTCATGACACTTACCATCATTCTTCTTCCTCTTCCCATCTTCACCACTCCTTCCTCTACCATCATCCCCCACCTTCAAGGCCTTCACCTGCTGGTTTGTCTTTCCAAGACAATGGTGCTCCCTTGTTTCTTGACACTGGTTCTTCCTCTCACAATAATAACACTGATTGCAGGTTCTTTTTCTGA 678 0.4381 MMNGRNKFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYLDSPLSSRLLSHHPQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTSTPTTTNTDHASTPTTILSITKNSPSSALTQTTHSLSPLTSHDTYHHSSSSSHLHHSFLYHHPPPSRPSPAGLSFQDNGAPLFLDTGSSSHNNNTDCRFFF. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00646 225 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g00646 225 MobiDBLite consensus disorder prediction 124 202 - -
Seca11g00646 225 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g00646 225 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Seca11g00646 225 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g00646 225 PANTHER GROWTH-REGULATING FACTOR 5 8 178 IPR031137 GO:0005634|GO:0006351|GO:0032502
Seca11g00646 225 Pfam WRC 78 120 IPR014977 -
Seca11g00646 225 MobiDBLite consensus disorder prediction 124 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00646 Seca-Chr11 6462223 6463595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00646 9 120 GRF Transcription Factor Family AT3G13960 71.429 2.53e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Seca11g00646 WRC 3.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00646 - - gmx:100783524 335.88