Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00628 ATGCAAAAGCAGAACTCACTCCCACTGCTCAACACAACCCATGTCAAACTTCTCGCCTTCGATCTCCTCTCCCTCACTCCTTCTTCTTCTTCTTCAGACCCTGTATTCTACCGCAGAGGCATTCCTCTCTCACGCGCAGAAACCCTAGGCACCGTAACCCTAAGGGACCTCAAATCCAATAGGTTCCTCAGGTTCGCCATCGACGACGGCACCGGCTGCATCCCTTGCATCCTCTGGCTCAACCACCTCTCCTCCCCTCACCTCGCACGCCGCCGGAGCCCACAAGACCTCCAACTCATCGCCGATTCCGCCGCACGCTCCGCTGCGCTGGTGAAGGTGGGAGTGGTGGCCAGAGTGAGGGGCCGAATCACAGCGTATAAGGGTTCCGTGCAGATAACAGTGTCGGATGTTATGCTGGAGAGGGACCCCAATGCGGAGATCCTGCACTGGCTCGAGTCTATCAACTTGGCTCGTAACTGTTACAATCTTCTGCCTCAACAACACTCTTCTGCCTCTGTTGCTCCACCTCCACCCAACTAG 540 0.563 MQKQNSLPLLNTTHVKLLAFDLLSLTPSSSSSDPVFYRRGIPLSRAETLGTVTLRDLKSNRFLRFAIDDGTGCIPCILWLNHLSSPHLARRRSPQDLQLIADSAARSAALVKVGVVARVRGRITAYKGSVQITVSDVMLERDPNAEILHWLESINLARNCYNLLPQQHSSASVAPPPPN. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00628 179 PANTHER REPLICATION PROTEIN A-RELATED 9 172 IPR040260 -
Seca11g00628 179 Gene3D - 8 164 IPR012340 -
Seca11g00628 179 Pfam OB-fold nucleic acid binding domain 51 138 IPR004365 GO:0003676
Seca11g00628 179 SUPERFAMILY Nucleic acid-binding proteins 30 155 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00628 Seca-Chr11 6256935 6257474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00628 40 156 Core DNA Replication Machinery Family AT2G24490 26.496 1.15e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00628 K23312 - zju:107409585 199.904