Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00617 ATGGACTCACCTTCCTTTCTTTTCCTTCTCCTTCTCCTTCTCCTTTTCCTCCTGCAACTCGTGACGCTATCAGTTATGGCCAAGAAAACTTACATAGTTCACATGAAACACCACCATGATGCCTCCATCTACCCCACCCGCCATGACTGGTACTCTTCCACTCTCCAATCTTCCGATTCCCTTCTATATGCCTACACCCATGCTTACAACGGTTTTGCCGCTGCCCTTGACCCTGAACAAGCACACGCACTGCGCACTTCAGATTCAGTTATTGGCGTCTATGAGGACACCCTCTACTCGCTCCACACCACTCGCACACCAGAGTTCTTGGGCCTCCAAGCCCATTTTGGGCTATGGGAAGACTTCCATCGAGCTTCACACGACGTCGTAATAGGGGTTCTCGACACAGGCGTCTGGCCAGAATCCCAAAGCTTCGACGACTCTGAAATGCCGCAAATCCCCACTCGATGGCGCGGCCAGTGTGAGTCCGCACCTGATTTCGACCCTTCCCTCTGCAACAAGAAGCTAATCGGCGCTCGCAGCTTCTCCAAGGGCTACCGTATGGCCTCCGGCGGAGGTACTTACAACAGGAAAAAAGCCACCGATCCTGCTTCGCCTCGCGACCGGGACGGCCACGGTACACACACAGCCTCCACCGCCGCCGGATCCGCCGTCGCTAACGCCACTCTCCTTGGCTACGCCACCGGCACAGCACGCGGGATGGCTCCTCAGGCGCGAATCGCTGCCTACAAGATCTGCTGGACTGACGGCTGCTTCGCCTCAGACATACTCGCCGGAATGGATCAAGCGATCCAGGACGGCGTCGACGTGCTCTCGCTCTCCCTCGGCGGTTCCTCCTCCGCTCCTTACCACCGCGACACCATCGCAATCGGAGCCTTCACGGCGATGGAGAGGGGAATCTTTGTTTCCTGCTCGGCGGGGAATAACGGACCTCGAAGTGGCTCCTTGTCCAATGTAGCTCCATGGATCATGACCGTCGGAGCGGGGACGCTGGACCGTGATTTTCCGGCGTACGCAGAGCTCGGGAACGGGAAACGTTTCGCCGGCGTTTCGCTTTACAGCGGAGAAGGAATGGGCGACGAACCGGTGGGTTTGGTTTATTTTAATGACCAATCCAACACATCAAGCAGCATTTGCATGCCCGGTTCACTTGACCCAACGCTCGTGCGAGGGAAGGTGGTGGTTTGTGACAGGGGAGTGAACGCACGTGTGGAGAAGGGTGCGGTTGTGCGTGACGCTGGAGGAGTTGGGATGATACTTGCGAACACCGCAGTTAGCGGTGAGGGAGTGGTGGCGGATAGTCACTTGGTACCGGCTGTGGCGGTGGGTGAAAGCGCGGGTGATGAGATCAGAGAGTATGTAGCGTTGGATCCTAATCCAACGGCTGTTCTGAGTTTCGGTGGGACCGTGTTAAACGTGAGGCCTTCCCCTGTAGTGGCATCGTTTAGCTCTCGCGGGCCCAATGGTGTGACGCCCCAAATCCTGAAACCTGATATCATTGGGCCTGGAGTTAACATCTTAGCCGGATGGTCTGGTGCAGTTGGCCCCTCTGGCTCTCAAGACACTCGTAAAACTCATTTCAACATCATGTCTGGTACGTCTATGTCTTGTCCACACATAAGTGGGTTGGCTGCGTTACTGAAAGCGGCCCATCCAGATTGGAGTCCAAGTGCTATTAAATCTGCACTCATGACAACTGCCTATACCTATGATAACACCAAGTCCCCACTACGGGATTCAACAGGAGAGGCCCTCTCCACACCATGGGCTTATGGTGCGGGCCATGTCAACCCACAAAAAGCCCTCTCCCCGGGCCTAGTCTATGATGCTGACACTCAGGATTACATTGCATTCTTGTGCTCCTTGAACTACACACTTGACCATGTACAACTCATTGTCAAGCGTCCCGATGTGAATTGTTCTATCAATTTTGCTGACCCAGGGGAACTGAATTACCCATCCTTTTCGGTCGTGTTTGGAAAGAAGAGTGTTGTTCAATACACGCGCACACTCACAAACGTTGGGGAGCCAGGATCTGTCTATGACGTGGCAGTAAATGGGCCATCAGTGGTGGAGATAACTGTGAATCCTACCAGGCTTGTGTTTGGGGAAGTGGGGGAAAGGCAAACGTACACAGTGAGTTTTGTGTCCAAAAGGGGTGTTGCTGATTCGGTTACGTCTGAATTTGGTAGCATTACGTGGAGCAATGAACAACACCAAGTTAGGAGCCCGGTTGCTTTTGCATGGACAGATTTATGA 2280 0.5408 MDSPSFLFLLLLLLLFLLQLVTLSVMAKKTYIVHMKHHHDASIYPTRHDWYSSTLQSSDSLLYAYTHAYNGFAAALDPEQAHALRTSDSVIGVYEDTLYSLHTTRTPEFLGLQAHFGLWEDFHRASHDVVIGVLDTGVWPESQSFDDSEMPQIPTRWRGQCESAPDFDPSLCNKKLIGARSFSKGYRMASGGGTYNRKKATDPASPRDRDGHGTHTASTAAGSAVANATLLGYATGTARGMAPQARIAAYKICWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSSAPYHRDTIAIGAFTAMERGIFVSCSAGNNGPRSGSLSNVAPWIMTVGAGTLDRDFPAYAELGNGKRFAGVSLYSGEGMGDEPVGLVYFNDQSNTSSSICMPGSLDPTLVRGKVVVCDRGVNARVEKGAVVRDAGGVGMILANTAVSGEGVVADSHLVPAVAVGESAGDEIREYVALDPNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDIIGPGVNILAGWSGAVGPSGSQDTRKTHFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTYDNTKSPLRDSTGEALSTPWAYGAGHVNPQKALSPGLVYDADTQDYIAFLCSLNYTLDHVQLIVKRPDVNCSINFADPGELNYPSFSVVFGKKSVVQYTRTLTNVGEPGSVYDVAVNGPSVVEITVNPTRLVFGEVGERQTYTVSFVSKRGVADSVTSEFGSITWSNEQHQVRSPVAFAWTDL. 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00617 759 ProSiteProfiles Serine proteases, subtilase domain profile. 98 609 - -
Seca11g00617 759 FunFam subtilisin-like protease SBT1.5 339 478 - -
Seca11g00617 759 FunFam Subtilisin-like protease SBT1.5 128 349 - -
Seca11g00617 759 Gene3D - 626 756 - -
Seca11g00617 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Seca11g00617 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 102 IPR037045 -
Seca11g00617 759 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Seca11g00617 759 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Seca11g00617 759 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Seca11g00617 759 Pfam Fibronectin type-III domain 656 753 IPR041469 -
Seca11g00617 759 CDD Peptidases_S8_3 99 575 IPR034197 -
Seca11g00617 759 MobiDBLite consensus disorder prediction 193 219 - -
Seca11g00617 759 FunFam Subtilisin-like protease SBT1.5 626 757 - -
Seca11g00617 759 SUPERFAMILY Subtilisin-like 101 613 IPR036852 GO:0004252|GO:0006508
Seca11g00617 759 CDD PA_subtilisin_like 348 469 - -
Seca11g00617 759 Gene3D Peptidase S8/S53 domain 128 622 IPR036852 GO:0004252|GO:0006508
Seca11g00617 759 FunFam Subtilisin-like protease SBT1.9 19 102 - -
Seca11g00617 759 Pfam Subtilase family 127 579 IPR000209 GO:0006508|GO:0008236
Seca11g00617 759 SUPERFAMILY Protease propeptides/inhibitors 28 100 - -
Seca11g00617 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 753 IPR045051 -
Seca11g00617 759 Pfam Peptidase inhibitor I9 30 102 IPR010259 -
Seca11g00617 759 Pfam PA domain 386 457 IPR003137 -
Seca11g00617 759 Gene3D - 339 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00617 Seca-Chr11 6099499 6102206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00617 14 756 Subtilisin-like Serine Gene Family AT2G05920 67.651 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00617 - - gmx:100786523 1232.24