Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00575 ATGGCAAAAGGTGGGAAGCTAATGAAACTGAAATCAGTGCTGAAGAAGTGGAACTCATTCGGAAACGGCAAGCAGAGCCGGCACAGCATCAGCGCCGTCGCCGATGAGGAGTCCTCTTCTTCCTCCAGATCAAACCTCCACCCTGTCTACGTCGGCAAGTCTCGCCGCCTCTACCGAGTCTCCTCCGACGTCGTCGATCACCCTGTCTTCCGTGAACTCGTCGAGAGGTCTCGTGATTCCGACGACCAAAACGACACCGTCGTCAATGTAGCCTGCGAAGTTGTCCTCTTCGAACACTTGCTCTGGATGCTCGAGAATGCTGATCCTCAACCTGAGTCACTCGACGAACTCGTCGACTTCTACGCTTGCTAA 372 0.543 MAKGGKLMKLKSVLKKWNSFGNGKQSRHSISAVADEESSSSSRSNLHPVYVGKSRRLYRVSSDVVDHPVFRELVERSRDSDDQNDTVVNVACEVVLFEHLLWMLENADPQPESLDELVDFYAC. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00575 123 Pfam Auxin responsive protein 10 104 IPR003676 GO:0009733
Seca11g00575 123 PANTHER EXPRESSED PROTEIN 19 122 - -
Seca11g00575 123 MobiDBLite consensus disorder prediction 19 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00575 Seca-Chr11 5692493 5692864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00575 6 106 Calmodulin-binding Proteins AT5G20810 26.316 5.59e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00575 - - gmx:100792286 188.734