Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00569 ATGCTCAAATCTTTGTTTTTGTCTTTTGAACAGGCTCTCATGGCAATGCCAGCTCCAGACTTCAGCTTGTGTCTCTTTTTGATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACAGGAAGGTTTCGGCAGTTCTGGGATGAAGCAGCAAAAAGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAGGCAATCCAAGGCTATGCGATTCATGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAACTGTTATAGCTGAGGCTATCAATATAGAGGGTTTATCCTTGGACAAATTCCTTGAACACCAAGTAGCTAACTGTGGTTGGGTTATTGAGAAAAGCCAAGGCAGGGGTCAACTTATTGTCCTTCCTAGAAATGAATTTAATGACCCAGTTTTGAAGAAAAACACTGCAGATAGTGTACCATTGGAGCACATTACTCGCATATTCCCTATTCTTAGCTGA 501 0.4232 MLKSLFLSFEQALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRTVIAEAINIEGLSLDKFLEHQVANCGWVIEKSQGRGQLIVLPRNEFNDPVLKKNTADSVPLEHITRIFPILS. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00569 166 Gene3D - 62 165 IPR036388 -
Seca11g00569 166 SUPERFAMILY ARM repeat 11 69 IPR016024 -
Seca11g00569 166 FunFam Eukaryotic translation initiation factor 3 subunit K 62 165 - -
Seca11g00569 166 SUPERFAMILY "Winged helix" DNA-binding domain 71 163 IPR036390 -
Seca11g00569 166 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 11 163 IPR009374 GO:0003743|GO:0005737|GO:0005852
Seca11g00569 166 Gene3D ARM repeat; domain 1 8 59 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Seca11g00569 166 Pfam CSN8/PSMD8/EIF3K family 11 127 IPR033464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00569 Seca-Chr11 5605315 5607561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00569 11 166 Eukaryotic Initiation Factors Gene Family AT4G33250 76.923 3.17e-89 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00569 K15028 - gmx:100306445 298.901