Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g00548 ATGGCGACACCCAATGCGACATGTCCAGCACCAATGAAGGCCACGTCCAATGGGGCATTTCAACATGAAAACCCTCTTGACTATGCACTTCCTCTGTTAATCCTCCAGATATGCTTGGTCGTGACCTTCACTAGATTCATTGCATTCCTTTGCAAACCCCTCAGGCAACCCAGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGTCCATCTGCAATTGGACGAAGCGAGACATTCTTGAACACAGTTTTCCCAAAGAAAAGCTTAACTGTTCTTGACACACTCGCCAACATTGGCCTTTTGTTTTTCTTGTTTCTAGTGGGTCTTGAGCTTGATTTGCGTTCTATCAAGCGTACTGGTCAAAAAGCCATAGCCATAGCCGTTTGTGGGATCACTGTCCCTTTTGTTCTTGGCATTGGCACATCTTTTGTACTTCGAGCTACCATATCCAAAGGTGTTGAGCCACTTTCCTTCCTTGTCTTCATGGGTGTTGCTCTCTCAATCACTGCCTTTCCTGTCCTTGCTCGAATCTTAGCTGAGCTTAAACTCCTCACTACTGATGTTGGCCGTATAGCAATGTCAGCTGCTGCTGTCAATGATGTTGCAGCTTGGATACTTCTTGCTCTTGCAATAGCCCTCTCTGGCTCTAACTCATCCCCCTGGATCTCTGTTTGGGTCTTGCTCTGTGGTGCTGCTTTTATCATCTTTGCTGTCCTTACCATAAGACCCTTGCTTGCAGCTATGGCTAGGCGTTCTCCAGATGGTGAACCAGTGAAGGAGATCTACATTTGCATCACATTGACACTAGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATGCACTCTTTGGGGCTTTTGTTGTTGGTGTAATTGTGCCCAAAGATGGTCCCTTTGCTGGGGTCTTGATTGAGAAGATAGAAGACTTGGTATCTGGACTTTTTCTGCCACTCTATTTTGCATCTAGTGGTTTGAAGACAAATGTGGCTACTATTAGTGGAGGACTTTCTTGGGGATTACTAGTACTTGTTATATTCAACGCTTGCTTTGGGAAAATCATTGGCACAGTCGTTGTATCATTAATATGCAAGGTGCCTTTTAGAGAATCCCTGGCACTTGGATTTCTCATGAACACCAAGGGCTTGGTAGAGCTTATTGTTCTCAATATTGGAAAGGATCGCAAGGTACTGAATGACCAATCTTTTGCCATTTGTGTTCTTATGGCATTGTTTACCACCTTCATCACCACTCCAATAGTGATGGCTGTGTATAAACCAGCTCGCAGAGGAGCACCTTATAAGCACAAAACACTTCAGCGCAAAGATCTTGACTCAGAGCTCAGAGTGCTAGCTTGCTTCCACAGCACCCGCAACATCCCCACATTAATCAATCTGGTAGAGTCTTCCCGTGGAACCCGTAAGAGAGGAAAGCTTTGTATATATGCAATGCACTTGATGGAACTCTCAGAGCGATCTTCAGCTATCACAATGGTTCACAAGGCACGCAACAATGGCATGCCATTCTGGAACAAGAAACAGGATGAGAAAGATCAAATGGTTATTGCTTTTCAAACTTATGGAAAATTGAGCAGTGTCAATGTCCGCCCCATGACAGCTATCTCACCTCTCAGCAACATCCATGAGGATATTTGTACTAGTGCACACCAAAAGCGTGCAGCCATAATTCTGCTTCCATTCCACAAACACCAGCGTGTGGATGGATCAATGGAGTCACTAGGACATTCATTCCATGTAATAAATGAGCTTGTGCTAAGTCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGTGGTCTTGGAGGGACAAGCCAAGTCCAAGCTAGTGATGTGTCCTTTAATGTAGTTGTACCTTACTTTGGAGGACGTGATGATAATGAAGCACTTTCATATGGGATGAGAATGGCTGAACACCCAGGGATTTTGCTCAGTGTGGTTAAGTTTGTACCTACACCTGGGAAGACATTGGCTTTTGGTGCTAAATTGGTTGGGGTATCATCAGACAAGGGCCAGAAAGTAGTAATTGAGGAAATTGATGGTAGTAGCCATGATGGTAAACAACATGATGATCAATTGTGGAGTGAGTTCTTAAGTGCAAGCAGCAACAATGAAGAGTCAATTAAGTATGAAGAAAGGTTGGTGGAAAGTAAAGGTGATATTGAGATAGCATTGAAGGAAATGAGCAGGAGCAATCTGATATTGGTTGGTAGAATGCCATCAGTAGCACCTTTGGTTAGCAAGAGTGATTGCCCAGAACTTGGACCTATTGGAAGCTATATGGCTTCTTCTGGTTTCTCAACCACTGCATCAGTTTTGGTAATTCAGCAATATAATCCCTCAACTGACATTCATCCACTGGTGATGGAGGCATCTGATTACCCAGAAGTGCCCGATACACCAAGGGTATAA 2436 0.4397 MATPNATCPAPMKATSNGAFQHENPLDYALPLLILQICLVVTFTRFIAFLCKPLRQPRVIAEIIGGILLGPSAIGRSETFLNTVFPKKSLTVLDTLANIGLLFFLFLVGLELDLRSIKRTGQKAIAIAVCGITVPFVLGIGTSFVLRATISKGVEPLSFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSNSSPWISVWVLLCGAAFIIFAVLTIRPLLAAMARRSPDGEPVKEIYICITLTLVLACSFVTDTIGIHALFGAFVVGVIVPKDGPFAGVLIEKIEDLVSGLFLPLYFASSGLKTNVATISGGLSWGLLVLVIFNACFGKIIGTVVVSLICKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQSFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTLQRKDLDSELRVLACFHSTRNIPTLINLVESSRGTRKRGKLCIYAMHLMELSERSSAITMVHKARNNGMPFWNKKQDEKDQMVIAFQTYGKLSSVNVRPMTAISPLSNIHEDICTSAHQKRAAIILLPFHKHQRVDGSMESLGHSFHVINELVLSHAPCSVGILVDRGLGGTSQVQASDVSFNVVVPYFGGRDDNEALSYGMRMAEHPGILLSVVKFVPTPGKTLAFGAKLVGVSSDKGQKVVIEEIDGSSHDGKQHDDQLWSEFLSASSNNEESIKYEERLVESKGDIEIALKEMSRSNLILVGRMPSVAPLVSKSDCPELGPIGSYMASSGFSTTASVLVIQQYNPSTDIHPLVMEASDYPEVPDTPRV. 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g00548 811 PANTHER CATION/H + ANTIPORTER 7 787 - -
Seca11g00548 811 Gene3D - 32 434 IPR038770 -
Seca11g00548 811 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca11g00548 811 FunFam Cation/H(+) antiporter 15 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g00548 Seca-Chr11 5361535 5364863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g00548 1 804 Antiporter Super Family AT3G17630 70.471 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g00548 K26731 - gmx:100780382 1330.08